Brachyistius frenatus (kelp perch): 138631730
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Entry
138631730 CDS
T10614
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138631730 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138631730 (cnot1)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138631730 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138631730 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
138631730
NCBI-ProteinID:
XP_069572976
LinkDB
All DBs
Position
Unknown
AA seq
2502 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAVDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTIMESSLAEFIQEVGYGFCASLDECRNIILQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDSSQAHTWNVEVLIDIVKEVNPNLNFKEVTYE
LDHPGFIIRDSKGLNIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMNPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLTGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGI
GSGIGSGMGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGI
SSGIGSSLGMPTVSADPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKEIDDEANSY
FQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQYPDKELH
ITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAALDRFKNRLKDYPQY
CQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQVQAQAQSQQ
PAGLKAPQPGQPSTLVTTATTTTTVAKTTTITRPTPSTFKKDVPPSINTTNIDTLLVATD
QTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEP
NFHSLYSNFLDTLKNPDFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMIT
LAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRPQNPWTMAIM
NVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKDKLKSLEEQLSAPKKEA
KPPEELLPVSTTGDFVPFAAPPSTPAATTTACTTTGPPTPQFSYHDINVYALAGLAPHIN
INVNISLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRKDFALDSEES
RMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMMEEAAARI
AQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPE
QIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWATDDVAQIYDK
CMADLEQHLHAIPPPLAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKAVEGLLDATS
GADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRN
HLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADLFHTIETLMRT
CAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEY
LLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQ
AEQQHNPAASVAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVL
IQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGF
VYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKG
TLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDM
LSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQL
INALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQL
RYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPA
FKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactaccgagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaagactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaactttatctctactctctgttacgctgttgacaatcccctgcac
taccagaagagtttgaagccatcggcccacttattcactcaactgagtaaagttcttaag
ctcagcaaggtccaagaggtgatatttggcctcgctttgctcaactccagcaacgcagac
cttcgtggttttgccgcacagttcatcaagcagaaacttccggacctcctgcggtcgtac
gttgacgcggatctcggaggaaaccaggaaggtggcttccaagacatcgccatagaggtg
ttgcacctgctgctctcccatctactgttcggacagaagggagcaagtggggttgggcaa
gagcagatcgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggataggatccta
ccagactcgggggagttagctaagaccataatggagagttctctcgcagaattcattcaa
gaagttggctatggcttctgtgcaagtctggacgagtgcagaaacataatcctccagtat
ggggtgagagaggtgacagctagccaggtggcccgagtcctgggcatgatggctcgtacc
cactctgggctcactgacggcatcccactgcagtccatctctgctccaggaagtggtatc
tggagtgacgggaaggataagaacgatagttcgcaggcacatacgtggaacgtcgaggtg
ctcatcgacatcgtcaaagaagtgaatcccaacctgaacttcaaagaggtgacatacgaa
ctggaccaccctggatttataatccgggacagcaaagggctgaatatcgtggtgtacggt
atccagagggggctgggcatggaagtcttccctgtagatctcatctatcggccgtggaaa
catgcagagggacagttgtcattcattcagcactctctgatgaacccagaggtgttctgc
tttgctgactacccctgtcacactgtcgccattgacatcctgaaggctccaccagaggat
gacaacagggagatcgccacatggaaaagcctggacctggtggagagtctgctcaggctg
tctgaggtgggccagtacgagcaggtgaagcagctgttcagcttccccatcaagcactgc
cccgacatgttggtgctggcattactgcagatctccacctcctggcacacgctgcgccac
gagctcatctccaccctaatgcccatctttctgggcaaccaccccaactccgccattatc
cttcactacgcctggcatggacagggacagtctccttccattcgtcagctaattatgcat
tcgatggctgagtggtacatgagaggggagcagtatgaccaggccaaactatcgcgcatc
ttggacgtggcccaggacttgaagtctctatcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgcgaatacctcaaacttgataaatgg
ctgactgacaaaatcagagaacatggggaacctttcatccaggcatgtgtgacgttcctg
aagagacgctgcccgtccattatggggggtctggcccccgacaaggatcagcccaaaagc
gcccagctgcccccagaaactttagccaccatgctggcctgcttgcagtcctgcgctggg
agtgtgtcccaggagttgtcggagaccatcctgaccatggtcgccaactgcagcaacgta
atgaataaagcccggcagccgccaccaggggtgatgccaaagggacgcgccccgagcacc
agcagcctggacgctatctcacctgtgcagatggaccctctgaccggcatgggttccctg
aacctggggggcacagccacctcccacactcagagcatgcagggtttcccgacctctctg
agttcagctttcagtaatccacagtccccagccaaggccttcccacctctctccaacccc
aaccccagcacgccgttcgggggtatcggcagcctcagctcgcagctccctggtatggac
tctggtcccttgggttcgggcatcggctcgggcatcggctcgggcatcggctcgggcatc
ggctccggtatcggctccggcatcggctcgggcatcggctccggcatcggctccggcatc
ggctccggcatcggctcgggtatcggctccggcatcggctccggcatcggctccggcatc
ggctccggtattggctcgggcatgggttccggtattggctcgggcatcggctcgggcatc
ggttccggtatcggctcaggcattggctccggtataggttccggtatcggctcgggcatt
ggctcgggcattggctcgggcattggctccggtatcggctccggcatcggctccggcatc
agctccggcatcggctccagtctggggatgccgacagtaagcgctgaccccttcggcacc
aggaagatgagcacacccggcctgaacccgccaacctttcagcagactgacctttctcag
gtgtggcccgaggcaaaccagcactttagtaaggagatagacgacgaagccaacagttac
ttccagcgcatctacaaccacccacctcacccaaccatgtctgtggatgaagttctggag
atgctgcagcggttcaaggactccaccatcaaacgggaacgagaggtgttcaactgcatg
cttcgcaacttgtttgaggaatacaggttcttccctcagtacccggacaaggagctgcac
atcaccgcctgcctcttcggcggcatcatcgagaagggcctggtcacctacatggccctg
ggcctggccctccgatacgttctcgaagccttaaggaaaccgtacggatccaaaatgtat
tactttggaatcgctgccctagataggtttaaaaacagactaaaggactaccctcaatat
tgtcagcaccttgcttcaattgctcacttcttgcaattcccccaccatttacaagagtgc
gtgcagtatatcgagtacggccaacagtcacgggaccctccggtgaagatgcagggctcc
atcaccaccccgggcagcctggcgctggcgcaagttcaagcccaggcccagtcgcagcaa
cccgccggcctcaaagccccgcagccgggccagcccagcaccctcgtcaccacggcgacg
actacaaccacagtggccaagacgaccaccatcaccaggccgacgcccagcaccttcaag
aaggacgtgccgccctccataaacacgaccaacatcgacaccctgctggtggccaccgac
caaacggaaaggatcgtggagcctccggagaacgtccaggagaagatcgctttcatcttc
aacaacctctctcagtccaacatgacacagaaggttgaggagttgaaagagacggtgaag
gaggagttcatgccctgggtgtctcagtacctggtgatgaagcgtgtcagcattgagccc
aacttccacagcctctactccaactttctggacacgctcaagaacccggactttgtcaag
atggtcctgaatgaaacttacaggaatatcaaggtgcttttgacctccgacaaggcagct
gccaatttctctgatcgctccctgctgaagaacctgggccactggttgggcatgatcaca
ctggccaagaacaagcctatcctctatacagacctggaagtgaagtctctgctactggaa
gcttacgtgaaaggccagcaggagctgctctacgtggttccctttgtggccaaagttctg
gagtctagtcttcgcagcatggttttcaggccccagaatccgtggaccatggccatcatg
aacgtcctggctgagctgcatcaggaacacgacctcaagttgaatttgaagtttgagatt
gaagttctgtgtaagaacttgtcgctggacatcaacgatctgaagccaggaaacctgctg
aaggacaaagacaagctgaagagcctcgaggagcagctgtctgcaccaaagaaggaggca
aaacctccagaggagctgctgccagtttctaccacaggagacttcgtcccgttcgcggct
cctccctccaccccagctgcaaccaccaccgcctgcaccaccaccgggccgcccacccct
cagttcagttaccatgacatcaacgtgtacgccctagcaggcctggctccgcacatcaac
atcaacgtcaacatctctctgctgcaggctcaccctcagctgaagcagtgcgtgcgtcag
tccgtggagcgagcggtccaggagctggttcaccccgtggtggatcgctccatcaagatc
gccatgacgacctgcgagcagatcatcaggaaggacttcgccctggattcggaggagtcc
cgcatgcgcgtggccgcccaccacatgatgagaaacctgaccgccggcatggccatgatc
acctgccgcgagccgctgctcatgagcatcgccaccaacctgaagaacagcttcgccgcc
gcactgagggctccgaccccccagcagagggaaatgatggaggaagctgcagccagaatc
gctcaggacaactgcgaactggcctgctgcttcattcagaaaactgctgtggagaaggcc
ggccccgagatggacaagagactcgccacggagttcgagctgaggaaacacgctcgccag
gagggacggcgctactgtgatcccgtcgttctgacttatcaggccgaacgcatgccggag
cagatcagactcaaggtgggaggagtggacccgaagcagctggctgtgtacgaggagttt
gccaggaacgttccaggtttcttaccaagcaatgatctctcccaacccaccggcttcctg
gctcagcccatgaagcaacaggcctgggccacggacgacgtggctcagatctacgataag
tgcatggcggatctggagcagcacctccatgccatccctccacccctggccatgaaccct
ctgacccaggcgctgcgcagcctgctggaggccgtcgctctggcccgcaactccagggac
ggcatcgccgctctcggcctgctgcagaaggctgtggaaggtctcctggatgctaccagc
ggggccgatgccgacctgctgcttcggtacagagagtgccacctgctggtgctgaaagct
ctgcaggacggacgtgcctacggacctcagtggtgcaataagcagatcaccaggtgtttg
atcgaatgccgcgacgaatacaaatacaacgtggaggccgtggagcttctgatcaggaac
catctggtgaacatgcagcagtacgacctgcacctggcgcagtcgatggagaacgggctg
cactacatggcggtcgccttcgccatgcagctggtgaagctgctgctggtggacgagcgc
agcgtgagccacgtcaccgaggccgacctcttccacaccatcgagactttgatgagaacc
tgcgcacactccagagccaacgcacctgaggggcttccccagctgatggacgtcgttcgc
tccaactacgaagccatgatcgaccgggcccacggcggacccaacttcatgatgcactct
gggatctcgcaggcgtctgagtacgacgaccccccgggcctgagggagaaggccgagtac
ctgctgagggagtgggtcaacctgtatcactcggctgccgccggccgggacagcaccaaa
gcgttctccgccttcgtcggccagatgcaccagcaaggcatcctgaagacggacgacctg
atcacgcgcttcttccggctgtgcacggagatgtgcgtggagatcagctaccgggctcag
gccgagcagcagcacaacccggcagccagcgtcgccatcatccgagctaagtgctaccac
aacctggacgccttcgtgaggctcatcgccctgctggtcaaacactcgggggaggccacc
aacacggtgaccaaaatcaacctcctcaacaaggtgctgggcatcgtggtcggggtgctg
atccaggaccacgacgtccgtcagacggagttccagcagctgccgtaccaccgcatcttc
atcatgctgctgctggagctcaacgcccccgagcacgtcctggagaccatcaacttccag
acgctcaccgccttctgcaacaccttccacatcctgagacccaccaaagcacccggcttt
gtgtacgcctggctggagctcatttcccaccgcatcttcatcgccaggatgctggcgcac
acaccgcagcagaagggttggcccatgtacgcacagctgctgatcgatctcttcaagtac
ctggcgccgttcctgaggaatgtagagctcaacaaacctatgcaaatactctacaagggc
acgctgcgggtgctgctggtgctgctgcacgacttccccgagttcctgtgcgactaccat
tacggcttctgcgacgtcatcccgcccaactgcatccagctgcgcaacctcatcctcagt
gccttcccgcgcaacatgaggcttcccgacccgttcacgcccaacctgaaggtggacatg
ctgagtgagatcaacatcgctccccggatcctcaccaacttcaccggcgtcatgccctcc
cagttcaagaaggatctggactcgtatctgaagacgcgctcgcctgtcaccttcctgtcg
gagctgcgcagcaacctgcaggtgtccaacgaaccgggaaaccgctacaacatccagctg
atcaacgcgctggtgttgtacgtgggcacgcaggcgatcgctcacatccacaacaagggc
agcaccccctctatgagcaccatcacccactctgcacacatggacatcttccagaacctg
gccgtggacctggacaccgagggacgttacttgttcttgaacgccatcgccaaccagctg
cgctaccccaacagccacacccactacttcagctgcaccatgctctacctgttcgccgag
gccaacaccgaggccatccaggagcagatcaccagggttctgctggagcggctgatcgtg
aaccggccgcatccgtgggggctcctcatcaccttcatcgagctgatcaagaatcctgcc
ttcaagttctggagccacgacttcgtgcactgcgcccccgagattgaaaagctgttccag
tccgtggcccagtgctgcatgggacagaagcaggcccagcaggtgatggagggcaccggt
gccagctag
DBGET
integrated database retrieval system
