Brachyistius frenatus (kelp perch): 138631750
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Entry
138631750 CDS
T10614
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138631750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfre03021
]
138631750
03036 Chromosome and associated proteins [BR:
bfre03036
]
138631750
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138631750
Coactivators
SAGA/TFTC/STAGA complex
138631750
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138631750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SH3_20
DUF5677
Motif
Other DBs
NCBI-GeneID:
138631750
NCBI-ProteinID:
XP_069573013
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGDRKPPAASYSDGKPEAAAAAAGHFSGK
VRDQVGSAEQPQQGHPGAGFTPEPGAIEPLSGRTRTSSTSAAAAGAAGTAGASLQTVGAS
PPAASPGPGPVTSTAQPAAAASFQRAAVLGPSAAPGVPPAEASRTSSPGSLGVNGSTGAG
KLVNSPAVPPPAGAGSVISAVSGSAAPQPGFPVPQSSVGSPAAGLQRHPSPVTGVALNGV
DPKGAPTPAASTSQVMNHSNPLLHTKMLAPSQPATGSSVILTSTPPPAAAQSPISQTQTG
TSTPAAVSLKPTVNGVAVVRPAGAPVVAPTIQQQRPTGLVVGSTRAAAPQPALAVRPQQQ
TTIQLPPGFTMPAGMVLVRTETGQLVMVPQQVLAQAQAKTQQGQTVANITQRPATPTAGA
TIRVTTATTAPVTHQTVRLASPSQTRMVQSTSTVQKALGVAPGGASVKMAVPQKAPTVIT
AGGVPGAKPAGVPSAPMAGASPATAPAGRVTVVSQEMQENVKKCKNFLATLIKLASHNSP
SPDTSKNVKALVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRQSLLSSQ
QSLVTAPPSTSAPPLAAPGSVTATAIRPRLPISPAGGAVRLNAPISNTTALALGRPGVQT
VQTRSPVVIGQTLRPQGAFVRGPTTIAGKSPMNLTAQANQKKLSDPGGGTFRDDDDINDV
ASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPPGLLHRRILETAKKLGVTEVPLE
VVNFVSHATQSRLRSLLETVSAVAQHRSDGGKDEEHYEQSSDVRSQLRFFEQLERMEKQR
KDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKK
RKMDSPGGGATSGNEVASGSGSGSASSASPRQQLRQRITRVNLRDFIFCLEQDRSTARSL
LLYKALLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtggacgagaaggcg
gtcagcgacctcgtcggctccctggaatctcagctgggcgaccgaaagcctcccgctgct
tcatattccgacgggaaaccggaggcagctgcggccgccgccggccacttctcagggaaa
gtgcgcgatcaagtggggtccgcggagcagccgcaacaagggcatccaggagcggggttc
accccggaacccggcgcgatcgagccgctctccggcagaacccgcacctcctctacctcc
gctgccgccgccggggccgcaggcaccgccggagccagcctacaaacagttggagcgtct
cccccggctgcctcccccggaccgggacccgtaacttcgaccgctcagcccgccgctgcc
gctagcttccagcgggcggctgtcctgggtccgagcgcggctcccggcgtccccccggcg
gaggcgtcccggacctcctctcccgggtcactcggtgtgaacggcagtaccggagccggg
aagttggtgaactcgcccgccgtccctccgcccgccggggccggctccgtgatcagcgca
gtcagcggctccgcggctccacagcccggcttccccgtacctcagtcctcggtgggctct
cccgctgcgggcctgcagaggcaccccagcccggtgaccggcgtcgccctaaacggggtg
gaccctaagggcgcccccacccccgccgcctccacctctcaggtcatgaaccacagcaac
cctctgctgcacaccaagatgctggcacccagccagcccgcgaccggcagctccgtcatc
ctgaccagcaccccccctccggctgccgcccagtcgcccatcagccagacccagacgggg
accagcacgccggcagccgtcagcctgaaacccaccgtgaacggggtggcggtggtgagg
ccagcgggagcccccgtggtggcccccaccatccagcagcagagacccaccgggctggtg
gtcggctccacccgggccgcagccccgcagccggcgctggccgtccggccccagcagcag
accaccatccagctgccgcccggtttcaccatgcctgcaggtatggttctggtccggacg
gagacgggtcagctggtcatggtcccccagcaggtcctggctcaggctcaggcgaagacg
cagcagggtcagactgtggccaacatcacgcagagaccggcgacgccgacggctggggcc
accatccgggtcaccaccgccaccacggctcccgtcacccatcagaccgtccgcctggcc
tccccctctcagaccagaatggttcagtccacctccactgtacagaaggcgctgggcgtg
gcccccggcggtgcctccgtgaagatggcggttcctcagaaagctccgacggtgatcacg
gcggggggggtgcccggagccaagcccgccggcgtgccgtctgcccccatggccggcgcc
tcgcccgctacagcgcccgccggccgagtcaccgtggtgtcccaggaaatgcaggagaac
gtgaagaagtgcaagaacttcctcgccacgctcatcaagctggcgtcccacaactcgccc
tcccccgacacctccaagaatgtcaaggccctggtgcaggacctgctcgatgcaaagatt
gagcctgaggagttcaccactcggctgcaggctgaactgaagtcctccccacaaccctac
ctcatccccttcctcaagaaaagccttcccgctctccgtcagtcgctgctcagcagtcag
cagtctctggtgaccgccccccctagcacctctgccccccccctggccgcccccggctcc
gtcaccgccaccgccatcagaccgcggcttcccatcagtccggccggcggcgccgtccgc
ctcaacgctccaatcagcaacacaacagctctggctctgggcagaccaggagtccagact
gtgcagactcgtagtcctgttgtcattggtcagacgctcagacctcaaggtgcgttcgtc
agaggaccgacaaccatcgcaggaaaaagtcccatgaacctcacagctcaggccaatcag
aagaaactcagtgacccagggggcgggacgttcagagacgacgatgacatcaatgacgtg
gcgtcgatggccggcgtcaacctcaacgaggaaaacgctcgtatcctagcaaccagctcg
gagctcgtcggcacgaagatccgctcctgcaaagacgagtcgttcctgccgcccggcctg
ctgcaccgccgcatcctggagacggccaagaagctcggggtgaccgaggtgccgctggag
gtggtgaacttcgtgtcccacgccacccagtccagactgcgctccctgctggagacggtt
tcagccgtcgctcagcaccgctccgacggagggaaggatgaagagcactacgaacagtcg
tcggacgtccgctctcagcttcgtttcttcgagcagttggagcggatggagaaacagagg
aaagacgagcaggagagagagatcctgctgaaggccgccaagagtcgcgcccgacaggaa
gaccctgaacaggcccgtctgaagcagaaggctaaagagatgcagcagcaggagctcgct
cagatgcggcagcgagacgccaaccttacggcgctcgccgccatcgggccgcgcaagaaa
cgcaagatggactctccggggggcggagccacgtcgggcaacgaggtggcttcaggctcg
ggctcaggctccgcctcctccgcctccccccgccagcagctccgtcagcggatcacaaga
gttaacctcagggacttcatcttctgcctggagcaggaccgcagcacggcgcgctccctc
ctgctctacaaggcgctgctgaagtga
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