Brachyistius frenatus (kelp perch): 138632217
Help
Entry
138632217 CDS
T10614
Symbol
abca5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138632217 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfre02000
]
138632217 (abca5)
Transporters [BR:
bfre02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
138632217 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_23
AAA_29
MMR_HSR1
Bac_rhamnosid_N
Motif
Other DBs
NCBI-GeneID:
138632217
NCBI-ProteinID:
XP_069573672
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MYFIPEASFSETTSRPYVIQMRNAGSMQPVYKRDAGVWHQTRSLLYKNLLIKWRTKQQSL
QELILPLLLLGILILISTLNPHVYYGGISTTELERESHIIQSLGYTPITNVTSHIMEEVA
EGMHIRDRLDTFTSEEDLENASLYEPSNYVGVVFMDSSATSYRLRFPYNQLPLPSDYTES
IANCFTSSVNCRAANYWYSGFIRLQSLIDAAIIQMQTKRSVWSEMDLQVVRMGQPGSVEV
QKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTAFWLSWGLLYAAL
VTTMSILMAVISTFTALFPNSDFFVVFFLIFLYGISSIFFSFMLTPLFKKPKFASTVGSM
LTVVFGCLSLFTVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLANGP
HPLYVPLLMLIIDCVLYLLLAIYLDQVLPGEFGMKRSLVYFLKPSYWSKRRKRYVEVSSV
YEAEVNGAPDGDECIEPVSPEFRGKEAIRINNIRKVYKEKDNVVEALRGLTFDIYEGQIT
ALLGHSGAGKSTLMNILCGICPPTNGTATIYGSPVAEIADGSEMKQLVGVCPQFNIIFDV
LTVEEHLRIFAAIKGIPPADIDAEVTKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAIL
GDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKAVISQGQ
LKCVGSSMFLKIKCGVGYHLRMSISERCDAERVTSLVKQHVSKAKLSRQHEAELTFTLPL
ESMDTFPGLFSELDSQPDLGVINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNREQAEDE
CDNASLDDTDQRLLTFSDSKSDVVSGHALWRQQFSTVAWLHMLNMRRERKAFIYTLALFL
VFVAAVLVLSLATGNIQIHSPDRQFLPIYLLKRNQSPRRYATSLLVQNSSGSDISDFIHN
LESQDINVEMMKHSDYMSAAPHSAAINVTGSSKGFRYSVAFNSTTVHSLPMAVNILSNAL
LRGLNGTGHIRTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTRDREIKC
RSTLRISGLVPSAYWCGQAVVDIPFYYLILSCMTIILFSFHTGNLLTSSNLTSVVLCTVG
FGPAMILFTYVFSFGFARVQSNRDFFSVISMMVCVVSASVVQLSFVNDNPGLTRNLHNAL
CLFNPLYPLMGCLNCITKATFLPSLDEENFLWKNLLISIVAPYLQCIMLLFVLRWLEIHY
GGRTMKNDQFCRISSKSKPKVERNPEEGLNEDEDVRMEKARVKEALTCQSCEDKAVVVVS
NLRKQYKGRREGFSFSKTRKVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTDPT
AGQVLMGDYSTEFSPVDNPLEHVGYCPQVNPLWPRITLQEHLEIYAAVKGLKGQDVPGII
KRVVNALELKDHVNKQAKSLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWR
AIRAAFKNHQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRGYSLEVK
LREELTGLQQVALLHKEILRIFPHAARQESFATLMVYKIPMEDVKSLAKSFYQLERAKRT
FNFEEYNFSQSTLEQVFMEFAKEQENEEDEPGSLSTTFQWQRLRQDGPVSVNYPDSIVHQ
L
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgaggccagcttcagcgagacgacttctcgtccgtacgtcatccag
atgaggaatgctggcagcatgcagcccgtttataaaagagacgcgggagtctggcaccaa
acccgaagtctcctctacaagaatctgctcattaaatggaggaccaagcagcagagcctt
caggagctgatcctccctctgctcctgttgggcatcctgatcctcatcagcaccctcaac
cctcacgtctactacggaggcatcagcacaacggagctggagcgcgaaagccacatcatc
cagagcctgggctacacgccgatcaccaacgtcaccagccacatcatggaggaggtggcc
gaggggatgcacatacgggatcgtctggatacgtttaccagcgaggaggatctggagaac
gccagcctgtacgagccgtccaactacgtgggcgtggtgttcatggacagctccgccacg
tcctacagactccgcttcccgtacaaccagctgcccctccccagcgattacaccgagtcc
atcgccaactgctttaccagctcggtgaactgcagagctgctaactactggtactccggc
ttcatccgcctgcagtctctgatcgacgcagccatcatccagatgcagacgaagcgctcg
gtgtggagcgagatggacctgcaggtggtgaggatgggtcagccgggctccgtggaggtg
cagaagttcccccacgccctcatctccatctacctggtcctggccttcacgcccttcgtc
accttcctcatcgtcaacgtggcagctgagaaggagcatcgcctcaaggacaccatgacc
atgatgggtctctacgacacggcgttctggttgtcgtggggcctcctgtacgccgccctg
gtgaccaccatgtccatcctgatggccgtcatctccacgttcacggcgctgttccccaac
agtgacttctttgtcgtgttcttcctcatcttcctctatggaatatcatctatcttcttc
tccttcatgttgactccgctgtttaagaagcccaagtttgccagcacggtgggctccatg
ctgacggtggtgttcggctgcctgtcgctgttcaccgtgctgatgaaggacttccctcag
ccgctggtctggctcctctgcctgctctcccccagcgccttctccatcgggattgcacag
gtggtgtacctggaggcgcagggagacggagctgtgttctcctctctggccaacggccct
catcctctctacgtgccgctcctcatgctgattatagactgtgtcctttaccttctgttg
gccatctacctggaccaggtacttcctggtgagtttggaatgaagaggtccttggtgtac
ttcctgaagccgtcctattggtccaaacggagaaagcgctacgttgaagtgagctcggtg
tacgaagcggaggtgaacggcgctcctgatggcgacgagtgtatcgagcccgtttccccc
gagttcagagggaaagaagccatccgcatcaacaacatccggaaagtgtacaaagagaag
gacaacgttgtggaggctctgagaggcctgacgttcgacatctacgagggccagatcacc
gccctgctgggacacagcggggccgggaagtccacgctcatgaacatcctgtgcggcatc
tgcccgcccacgaacggcacggccaccatctacggctccccggtggccgagatcgcggac
gggtcggagatgaagcagctggtgggagtctgccctcagttcaacatcatctttgacgtg
ctcaccgtggaggagcacctcaggatcttcgctgccatcaaagggatcccgccggcggac
atcgacgccgaggtcaccaaagtgctgaaggatctggacctggagaagatcatgacggct
caggccaagaacctgagcggaggccagaagaggaagctgtcagtgggcatcgccatcctg
ggagatccaaagatcctgctcctggacgagcccacggccggcatggacccctgctcccgg
caccaggtctggtctctgctgaagagccggcgggccggcagagtcacggtgctcagcacg
cactacatggacgaggcagacatcctagctgatcgcaaagcggtgatctctcagggacag
ctgaaatgtgtcggctcttccatgtttctaaagatcaagtgtggtgtcggttatcatctc
aggatgtccatcagtgagcggtgtgacgctgaaagggtcacgtctctggtcaaacagcac
gtctccaaagcgaagctgtcccggcagcacgaggcagagctgacgttcacgctgccgttg
gagagcatggacacatttccaggccttttctccgagctcgactctcagcccgatctggga
gtaataaactacggggtttccatgacaacactggaggatgtttttctccgtttggaggcg
gaggccgaggtggaccaagctgactacagcgtgttcaaccgagagcaggcggaggacgag
tgcgacaacgcctccctggacgacaccgaccagcggctgctcaccttctcggacagcaag
tcggacgtggtgtccggtcacgccctgtggaggcagcagttcagcaccgtggcctggctg
cacatgctcaacatgcgccgggagaggaaggccttcatttacactctggctctgttcctg
gtgttcgtggccgcggtcctcgtcctctctctggcaacaggaaacatccagattcactcg
ccggaccgacagtttttacccatctacctgctgaagaggaaccagtcgccgcggcgatac
gccaccagtctcctggtccagaactcctccggctctgatatttctgacttcatccacaac
ctggaatctcaggatatcaatgtggaaatgatgaaacacagcgactacatgtctgcagcg
ccgcacagcgccgccatcaacgtaaccggatccagcaagggtttcagatacagcgttgca
ttcaacagcaccacagtgcactcgttgcccatggcggtcaatatactgagcaacgctctc
cttagagggctgaatggtaccggacacatccggacctggaccaaacccttcgactatcaa
atccccgacgccacgtcctatgctctggtctacatcgaggcaatcatactggggatgctg
gcggccgggatgcccgcttattttgcaatggaccacactcgagaccgagagatcaagtgt
cgctctacgctgcgtatctccggtctggtcccgtcggcgtactggtgcggccaggcggtg
gtggacatccccttctactatctcatcctgtcctgtatgaccatcatccttttctccttc
cacaccgggaacctgctgacctccagcaacctcacctctgtggtcctctgcactgtcggc
ttcggcccggccatgatcctcttcacctacgtgttttcttttggcttcgcccgagtccag
agcaacagggacttcttctccgtcatctccatgatggtgtgtgtggtgtcggcctctgtg
gttcagctgtcattcgtcaacgacaaccccggactgacgaggaacctccacaacgccctg
tgtctcttcaaccctctgtacccgctcatgggctgcctcaactgcatcaccaaggcgacc
ttcctcccgtctctcgatgaggagaacttcctgtggaagaacctgctgatctcaatcgta
gccccctacctccagtgcatcatgctgctctttgtgcttcgctggctggagatccattac
ggagggaggaccatgaaaaacgatcagttctgcaggatctcgtccaagtcgaagcccaaa
gtggagaggaacccggaggaaggtctgaacgaagacgaggacgtccggatggagaaggcc
cgagtgaaggaggcgctcacctgtcagtcctgtgaagataaagccgtggtggtggtgagt
aacctgaggaagcagtacaagggccggcgagaagggttttcattcagcaagacgaggaag
gtggccaccaagaacatctcattctgtgtccgcaaaggggaagttctgggactgttgggc
cccaatggagccggaaagagcaccatcatgcacatgttgtcgggggacacggacccgact
gcaggccaggtgctgatgggggactacagcactgagttttctccagtggacaaccctctg
gagcacgtgggctactgtcctcaggtgaaccctctgtggccgcggatcaccctgcaggaa
catctggagatctacgctgccgtcaagggtctgaagggacaggacgtcccggggatcatc
aagcgtgtggtgaacgctctggagctgaaggaccacgtgaacaaacaagccaagagcctc
tcagcgggactcaaacgcaagctgtgctttgccttgagcatgatcgggaatcctcagatc
gtcttactggacgaaccgtcatcggggatggatcctaaatctaaacagcgcatgtggagg
gccattcgtgctgcgttcaagaaccatcagcggggcgccatcctcaccacacactacatg
gaggaggcggaggccgtgtgcgaccgcgtcgccatcatggtttcaggccagctcaggtgc
atcggctccatccaacatctcaaagggaagtacggtcgaggttacagtctggaggtgaag
cttcgggaggagctgacggggctccagcaggtggcgctgctgcacaaggagatcctgcga
atcttcccgcacgctgcccggcaggagagcttcgctactctgatggtttacaagatcccc
atggaggacgtcaagtcactggccaagtctttctatcagctggagagggcaaagcgaaca
ttcaactttgaggagtacaacttctctcagtccactttggagcaggtgttcatggagttc
gccaaggagcaggagaacgaggaggacgagccgggctccctcagcaccaccttccagtgg
cagcggctgcgtcaggacgggcccgtctccgtcaactacccggacagcatcgtgcaccag
ctgtga
DBGET
integrated database retrieval system
