Brachyistius frenatus (kelp perch): 138632313
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Entry
138632313 CDS
T10614
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138632313 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138632313 (exosc9)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138632313 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138632313
NCBI-ProteinID:
XP_069573900
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MKDTPLSNCERDFLLKAIEEKKRLDGRQTYDYRKIKITFGTDYGCCFVELGQTRVMAQVS
CELVAPKESRPNEGIMFFNIELSPMASPAFEPGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHMLNNDGNLMDASSVAAITALSHFRRPDVGIQGEEVIVYSAEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELIHQALLNDKTARKAGGRCGFAESMPQERITALKMDE
TPVEMTDVAERVDDIVRKAEAPPPTVASPVVPFPGVGQVGQNTWGLEEEEEDDDDAEEEE
DDSGEEQLEKVTKMEESRGDVVEISDSEEEEVVVLHPEKPDKTSKNTGSSSHQKGAATSK
KRQNK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacgccgctgtccaactgtgagcgggatttcctgctgaaagccatcgaagag
aaaaagcgcctggacggacgacagacttacgactacaggaagatcaagatcacgtttggg
acggactatgggtgctgctttgtggagctgggtcaaaccagggtcatggcccaggtgtcc
tgtgagctggtggcgcctaaagagagccgacccaacgagggaatcatgttcttcaacatc
gagctgtcgcccatggcctctccggcgttcgagcccggaagacagtctgagttgtcggtg
aagctcaacagacagctggaaagatgcctgaggaactccaagtgcatcgatacggagtcc
ctgtgtgtggtgtctggagagaaggtgtggcagatccgagtggacgtccacatgttgaac
aatgacgggaacctgatggacgcctccagcgtcgccgccatcaccgcgctgtcccacttc
agacgccccgacgtcggcatccagggcgaggaggtcatagtgtacagtgcggaggagaga
gacccgattcctctgagcatctaccacatgcccatcagcgtcagcttctccttcttccaa
cagggaacttacctgctggtggacccgtgcgagcgggaggagcgagtgatggacggcctg
ctgatgatcgccatgaacaaacaccgagaaatctgctccatccagtccagcgggggcatc
atgctgctgaaagagcaggtcatgaggtgcagtaaaatagccagcgtcaaagtgtctgaa
atcacggagctcatccaccaagccctgctgaacgacaagacggccaggaaggccggcggt
aggtgcggcttcgcagagtcgatgcctcaggagcgaatcacggcgctgaaaatggacgag
acgccggtggagatgacggacgtggccgagagagtcgacgacatcgtccggaaagccgaa
gccccgcctccgacagtagcatccccagtggtgccgttcccaggtgtcggacaggtgggt
cagaacacctggggactggaggaggaggaggaggatgacgacgacgctgaagaggaagaa
gatgacagtggcgaagagcagctggaaaaagtaacaaagatggaggagagcagaggagat
gtggttgagatatcagacagtgaagaggaggaggtggtcgttcttcatccagagaaacca
gacaaaacgtctaaaaatacaggctccagttctcaccagaagggggcagcaacatccaag
aaaaggcagaataaatga
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