Brachyistius frenatus (kelp perch): 138632343
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Entry
138632343 CDS
T10614
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03013
Nucleocytoplasmic transport
bfre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138632343 (pnn)
03015 mRNA surveillance pathway
138632343 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138632343 (pnn)
03041 Spliceosome [BR:
bfre03041
]
138632343 (pnn)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138632343 (pnn)
Spliceosome [BR:
bfre03041
]
Complex C
Other components
EJC/TREX
138632343 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
138632343
NCBI-ProteinID:
XP_069573939
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLSGPMAGLGGGRGRGV
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQK
LEVQAEAEKKKVESEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLNDSTNKLNAVFEERCEAFAEHLSKMESRPRRQPNREQDGN
TAATGTDHPAEGKPAGQAVKLTGNKANVVIDEEEDEEEEEEEREKERARKVPEREEGEEK
EELLKKEDEGMELSEEGGERKGGEDRKEKGGKEASPGSGEMEVEQGVEKEKKEEDRGKEK
EKEDRGKEKEKEDRGGKEKEDRGKGKEKEDRGKGKEKEGEADRKQGLTDLQDVKAEDTLS
SEPTVSSQETPNSSHQPQPVHAAGEPGVKSPGTHGASPAPQPHTASTMPEQDVTIPGFKV
QDFTVENQAVEAKSGEEAPQKLPDSQEAPIIPPAKEGEDGARGRKKAKEPKKGRSRSKSS
SSSSSGSSSSGSSSSSSGSSSSSSSSSSSSSSSSRSRSRDSGKRKRRPSDRGRDRKKGEE
RSHRKRGGSSGGGRDSKGSKERRKRRSEEGRGRSSRSDREHKDRDRKDKRR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggtgcggagtctgcaagaccagctcgaaaaagccaaagaaagcttaaaa
aatgtggacgataatattcgtaaattgaccggacgtgatcctaatgaatcaagaccgggt
cagatccgtcggctcagcggccccatggcgggcctcggcggaggtagaggcagaggagtc
aacctgctcaggcgtagtctctccgacatgggaagcggcggcccccctgccaagcagaga
gacatcgaaggagccctgctgaggctggccggggaccagagggccaggagagactcgcgt
cacgacagcgacgccgaggatgacgacgatgtcaaaaagccggcgttgcagtcgtctgtt
gtagctacctccaaggagagaacacgccgagatctcattcaagatcagaccatggacgag
aagggcaaacagaggaatcggcgcatgttcggcctgttgatggggacgctgcagaaattc
aagcaggagtccaacgtctctacagagaagcaaaagagacgtacagagatcgagcagaag
ctcgaggttcaggctgaggctgagaaaaagaaggtggagagtgagaagagggagctgttt
gaggagaggagagccaagcagaccgagctgagactgctggagcagaaagtggaattagct
caactgcaagaggagtggaccagccacaacaatcgcctggtaaaatacattcgcaccaag
acgaagcctcacatcttctacctgcctggaaaaatgtgctccgctacacagaaactcctc
aatgactccaccaataaactaaatgctgtgttcgaggagaggtgtgaggcttttgccgaa
cacctcagcaagatggagtcgcgcccccggcgacagccgaaccgcgagcaggacggcaac
acagcggcaacagggacggaccacccggcggagggtaagccagcaggtcaggcagtcaag
ctgacaggtaataaggccaatgtagtgatagatgaggaggaagatgaggaggaggaggag
gaggaaagggaaaaagagagagctagaaaggtgcccgagagggaggaaggggaggagaag
gaggaactgttgaagaaggaggatgaagggatggagctgagtgaggagggaggtgagagg
aaagggggagaggaccggaaagagaagggaggcaaggaggcgagtccagggtcaggggag
atggaggtggagcagggggtggagaaggagaagaaggaggaggacagggggaaggagaag
gagaaggaggacagggggaaggaaaaggagaaggaggacaggggggggaaggagaaggaa
gacagggggaaggggaaggagaaggaagacagggggaaggggaaggagaaggagggagaa
gcagacaggaagcaggggctcacagacctccaggacgtaaaagccgaggacaccttgtcc
tccgaaccgaccgtaagcagccaagaaacgccaaacagcagtcatcagccccagccggtc
cacgctgcaggagaaccaggagtaaagtccccggggacccatggggcctcgccagcccct
caaccccacacagcctccacgatgcctgagcaggatgtcaccatccctggatttaaggtt
caggacttcacagtcgagaaccaggcggtggaggcgaagtcaggcgaagaagccccacag
aagctgcctgattcccaggaggccccgatcatcccgcctgctaaggagggcgaggacggc
gcccgggggaggaagaaggcaaaggaaccgaagaaaggccgcagtcgcagcaaaagctcc
tcctcttcctcctccggatcgtcctccagcggaagttcctcttcctcctccggatccagc
tcttcctcatcctcatcctcctcgtcctcctcttccagcagccggagtcgcagccgggac
agcggcaagcgcaagaggaggccgtcggaccgaggcagggacaggaagaagggagaagag
agaagtcaccgcaagagaggcgggagtagcggaggagggagggactcgaagggatccaag
gagaggaggaagaggaggagcgaggaagggaggggcaggtcgtcccgcagcgatagggag
cataaagatagagacaggaaggacaagagacgctga
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