Brachyistius frenatus (kelp perch): 138632378
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Entry
138632378 CDS
T10614
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
138632378 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfre03036
]
138632378 (ercc6)
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138632378 (ercc6)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
138632378 (ercc6)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
138632378 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DegQ
Pneumovirus_M2
Motif
Other DBs
NCBI-GeneID:
138632378
NCBI-ProteinID:
XP_069574003
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MPAEGSDDQLPCSLSSPASAALTPGGTEEDGATGGSAVCTFPENSQGSEAAAAYPANTGP
GDSNSAGKRSGALLQIDRQRIQAASASSGADELQGLGVAVYDQDVLEQGVLQQVDEAIQE
ASQAAAKAEAEKEYHSVLDDVRSVTASLKQINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQRRLQAILGGEDTQRVEAELLAEDDEEEEAGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIPQKEVKKGPRKLMLAENSAFDEYLADQAKLATERKRVPLLKKKRS
SRFSPNEEDRGTTKRTVSSSKDKKLKKRMQKLQITALKAHPKARPKAEPQLPKPRRKRHT
EGEDTESEGSEYLPSDEGIDPDQEKREAMEEGFGEDDDEEYELKPYKGKIERRGRKKVKT
KDSEEEYSPESSDEEENDKGKDKKHKDDGDVEYYRQRIRKWKRQRLREREEKRERDEELT
DDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIEVISFL
AGLSYSKLRTRGSNYRYFGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSN
KEKLIPEIASCHGILITSYSAVRNLQDALQRYDWHYIILDEGHKIRNPNAGVTTACKQFR
TPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQT
AFKCACVLRDTINPYLLRRMKADVKASLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVH
QILNGDMQVFSGLIALRKICNHPDLLSGGPRLLRGIPEDHLTEDEHFGFWKRSGKLIVVE
SLLRLWFKQGHRVLLFTQSRQMLHILEVFLREYNYSYLKMDGTTTIASRQPLIARYNEDK
SIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSDPDGTQGTETSAIFAGT
GSDVKAPKKLERPRPSHTVNHGSHTHKHSSAHLNDTDADSRNSTDTPALRDGNTSPCSKT
SQGEPNVPMDSQSTNHNGVDVMPYISANTLHSGQNSNRGCDAAMKNSNSASYQHHKDKDC
ALTSPQKHRQKTKHCDSADLDKHKHKKRRHSRDARFEGRRISHLVKKRAFQKEEREDNAT
QDQKKSDDYVLAKLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVAKDALKALKISRQ
KCRLPYNTPPPPPAKKRFGQKKNSLLAAPSVQSVPTPTKCKDAAIIKRSVLKKPGSGAHF
SGEGAESDSISASLSSSSLLAKMRARNHLNTPSSQREEAEEEEEEDEEGSGAPGAPGASG
PPAPPTEHDELLVDLRNFVAFQANVDGQATTQEVLEYFKPRLTQKQAPVFRELLRSICDF
HRTSGQEGIWRLKESFC
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaggttcagacgaccagctgccctgctcgctctccagcccggctagtgct
gccctcaccccgggagggacggaggaggatggagctacagggggctccgcggtctgtact
ttccctgaaaacagccagggctctgaggcggctgcagcctaccctgccaacactggacct
ggggatagcaacagcgctggcaaaaggtccggagccttgcttcagatcgaccgacagcgc
atccaggcagcgtctgccagctctggagctgatgaacttcagggcctcggtgtggctgtc
tatgaccaggatgtcctcgagcaaggtgttctgcagcaggtggacgaggccatccaggag
gccagtcaggctgctgctaaagctgaggctgagaaggagtaccactctgtgttggatgat
gtcaggtctgttacggcgtctctaaaacagatcaacaagatcattgagcagctgtctccg
tatgcggcctccagcaaagacatcagtcggaagattgaatctgtcaaacgacagaaagaa
aataaggagaaacagctgaagaaagtcagagccaaacagaggcgacttcaagccattctg
ggaggagaggacactcagcgagtggaagctgagcttttggcagaggatgatgaagaggaa
gaagctgggccatccacactgggaagcatgctaatgccagctcaggaaaccgaatgggag
gagcttatacggaaaggtcacatgaccccttttggaacccggatcccacagaaggaggtt
aagaaggggcctcgaaaattgatgctggctgagaactctgcctttgacgagtatttggcc
gaccaggccaagttggctaccgagaggaagagagtccctcttctaaagaaaaaaagaagc
tctagattcagccctaatgaggaagacagggggacaaccaaaagaactgtttcctcttcc
aaggataaaaagctgaagaagcgcatgcaaaagctccagataaccgctctgaaggcccat
cctaaggcccggcccaaggctgagccacagctcccaaaaccaaggaggaagcgtcacact
gagggagaggacacagagagcgagggctccgagtacctgcccagtgatgaaggaatagat
cctgaccaagagaagagagaagccatggaagagggctttggggaggatgatgatgaagag
tatgagttgaaaccttacaaggggaaaattgaacggagagggaggaagaaagtaaagaca
aaagacagtgaggaagaatacagtccagagagttcagatgaagaggagaatgacaaagga
aaagacaaaaaacacaaagatgatggagatgtggagtactacaggcagcgaataaggaaa
tggaagcggcagcgtctacgagaaagggaggagaagagagaaagagatgaagagcttaca
gatgatagtgatgcagagtttgatgaaggcttcaaagttcctggtttcctctggaaaaaa
ctttacaagtaccagcagacaggtgtgcggtggatgtgggaactccactgtcagcaggca
ggtggcatcctgggagacgagatgggattgggtaaaaccatcgaggtcatcagctttctg
gctggactgagctacagcaaactgagaacaagagggtccaactacaggtattttggcctg
ggtccgacagtcattgtgtgcccagctacagtcatgcaccagtgggtgaaggagtttcac
acctggtggcctccgttcagagtggcagttctacatgaaacaggctccttcacgagcaac
aaggaaaagctgattccagaaatagcatcgtgtcacggtatcttgatcacctcatattca
gctgtgagaaatctgcaggatgctctacagcggtacgactggcactacattatcctggat
gagggccataagatcaggaatccaaatgctggagttaccactgcctgcaaacagtttcgc
actccccacaggttcatcctgtcaggctcacctatgcagaacaatctgaaggagctgtgg
tctctgtttgactttgttttccctggcaaactgggaacattgcctgtcttcatggagcag
ttctctgtgccaattaccatgggaggatacagcaatgcctcacctgtacaggtgcagacg
gcgtttaagtgtgcatgtgtgctgagggacaccataaatccttacctgctcagaagaatg
aaggcggacgtcaaggccagcctctccttacctgacaaaaatgaacaggttctgttttgc
agattaacagaagaacaacgtcaagtgtatcagagcttcttagattccaaagaggtccac
caaatactaaacggagacatgcaggtgttctcaggtttgatcgcactgcggaagatctgt
aaccacccagaccttttgtcgggcgggccccggctgctgaggggaatccctgaggaccac
ctaactgaagacgaacactttggcttttggaaacgctcaggcaagctgatagtggtggag
tcactgctgcgtctctggttcaaacagggccacagggtcctgctcttcactcagtctaga
cagatgctgcacatcttggaggtgtttctaagggagtataattactcgtacctgaaaatg
gacggaacgaccacaatagcttcccgtcagccgctcatcgctcgctacaacgaggacaaa
tccatttttatcttcttgttgaccactaaagttggaggtctgggagtcaatctgactgga
gccaacagagtcatcatttatgacccagactggaaccccagtacagacacacaggctcgg
gaaagagcatggaggatcggtcaaaagcagcaagttacaatctacagactgctgactgca
gggaccatcgaagagaaaatctaccacaggcaaatcttcaaacagtttctcaccaatcgt
gttctgaaggatcccaaacaaagacgcttctttaagtctaatgatatctatgagctcttt
actctgtctgaccctgatggaactcagggaacagagaccagcgccatatttgcaggaact
ggctctgatgtcaaagcacccaagaaactcgaaaggccgaggccatcacacacagtaaac
catggcagccacacacataaacactcctcagcacacttgaatgatacggatgcagacagc
agaaattcaacagacactcctgcattaagagatggaaacacctctccatgcagtaaaact
tctcagggtgaaccaaatgtcccgatggacagtcaaagcactaaccacaatggtgtggat
gtcatgccatatatttcagcaaatacactgcacagtggacaaaatagtaacagaggctgt
gacgcagcgatgaaaaactcaaactcagccagctatcagcatcacaaagacaaagactgt
gccctgacgagcccacagaaacacagacagaagacaaagcactgtgactcagctgatttg
gacaaacacaaacataagaaacgcagacactcccgggatgctcgatttgaaggccgccgc
atctctcatttggtaaagaaaagggcttttcagaaggaggagagggaagacaatgcgaca
caggaccagaaaaaatctgacgattacgtcttggcgaagctcttcaagaaatctggtatc
cacagtgtgatgcagcacgacaccatcatggagtcgtccaaccctgactatgttcttgtg
gaggcagaagccaacagggtggctaaagatgcccttaaagctcttaagatttctcggcag
aagtgcagactgccctacaatacacctccgcctccaccagcaaaaaaacgttttggacag
aagaagaattctctcttagctgctccgtctgttcaatctgtccccactccgaccaaatgc
aaggatgctgctattataaagagatctgtgttaaagaaacctggctcaggagctcatttc
agcggggagggggcagaaagtgactcaatctccgcctcgctctcctcctcctctctgctg
gccaagatgagagcccgtaatcacctcaacacgccctccagccagagagaggaggccgag
gaggaggaggaggaggacgaggagggctccggagctccaggagctccaggagcaagcggc
cctcctgctccacccactgagcatgacgagctgttggtggatctgcgcaactttgttgcc
ttccaggccaatgtggacggacaggccaccacccaggaagtgctggagtatttcaaaccc
agactgactcagaaacaggcgcctgtcttccgagagctcctcaggagcatctgtgacttt
cacaggacctctggccaggagggcatctggagactgaaggagagcttttgttga
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