Brachyistius frenatus (kelp perch): 138632594
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Entry
138632594 CDS
T10614
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04137
Mitophagy - animal
bfre04140
Autophagy - animal
bfre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138632594 (hif1al)
04137 Mitophagy - animal
138632594 (hif1al)
04148 Efferocytosis
138632594 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138632594 (hif1al)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138632594 (hif1al)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
138632594
NCBI-ProteinID:
XP_069574393
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MFGVYNLVQKKRENRYRCSVFRLNMEQKEETVAVKRTSLEQRKLRSRDAARCRRSQETDV
FYELAHTLPFPHRVSAHLDKAAIIRVTLSFLQMHHLLRPDEGEKEESDEDEKEDDDPMDV
FYPQALAGFIMVLAEEGDMIYLTENVNKHIGIAQLELLGQSIYDFVHPCDQEELRDLLTP
RPGLSKKSRNEQPSERNFFLRMKSTLTSRGRSVNIKSATWKVLHCTGRMRPFGGGSTSPP
AASVMTLLCEPVPHPSSVEFPLDTRTFLTRHSMDLHFTHCEGRVTELVGYKPDDLIGRSA
FEFHHARDSNHINKSLRTLLSKGQVITSHYRFLANDGGFVWAETQATVLYSSKTSQPEAI
VCLNFILSAVEQPDVVFSAEQTRCGRLPKDEAVSPPLAPEDCWISDVCDSEPEDIERPAE
TEDADSDVSSAAELLVKLKETPDDLLQLDPEADDAMAPLTGGFVELSFATSTHPNLVPDH
PQDLCSPQLRQLLSPIFNPLTPPSSSSSSSPSSPEPSPCETAATDTGKVKKILAFCPDDA
QEKGGPQEAMDLDMLAPYISMDDDFQLTLLNTLPEEADKPSDATPAAAASRKRTHNPDEE
MPAQLMVHDKRQKHDPSSIEEELLLSHRLLGCLEEADQSDLTLDPGPGPRGCSQLLTDRD
PVLGGIQGLCDTAVLMRDIFSGLTRGPPDLSPPLSPLT
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgtttacaatcttgtgcagaagaaacgagaaaatcggtatcgctgttcggtg
tttcggttgaacatggagcagaaggaggagacggtggcggtcaaacggactagtttggag
cagagaaagctgcgttctcgtgatgcggccagatgtaggcgaagtcaggagactgatgtg
ttttacgagctcgcccacaccctgccgttccctcaccgagtctccgcacacctggacaaa
gccgccatcatcagagtgaccctcagcttcctgcagatgcaccacctcctgcgacctgat
gagggtgagaaagaagagtccgacgaggacgagaaggaagacgacgatccgatggacgtc
ttctatcctcaggcgctcgctggcttcatcatggtgctcgctgaggagggagacatgatc
tacctgacggaaaatgtcaacaaacacatcggcatcgcacagctggagctgctgggtcag
agtatttatgactttgttcacccctgtgatcaggaggagctccgagacctgctgactcca
cgcccaggtttgagcaagaaatcccggaatgaacagccaagcgagagaaacttcttcctg
cgaatgaagagcacgctgaccagcagggggcgcagcgtcaacatcaagtcggctacctgg
aaggtcctccactgcacaggtcgcatgcgtccgttcggcggcggctccacgtcgccccct
gcagccagcgttatgactctgctgtgtgagcccgtccctcacccgtccagcgtggagttc
cctctggacacccggaccttcctcacccgccacagcatggacctgcacttcactcactgc
gagggcagggttacagagctggttggatacaaaccggacgatttgattggacgctcagcc
tttgagtttcatcacgcacgcgactcaaatcacatcaacaagagcctgcgcacattgctg
tccaaaggtcaggtgatcaccagccactaccgcttcctggcaaacgacggcggcttcgtc
tgggcggagactcaagcgaccgtcctctacagcagcaagacgtcgcagcccgaggccatc
gtctgcctcaacttcatactcagcgccgtggagcagccagacgtcgttttctccgccgag
cagacccgttgtggccggctgccgaaagacgaagccgtctcaccgccgctcgcaccggag
gattgttggatttccgacgtctgcgattctgaacccgaggacatcgagcgtccggctgag
actgaagacgcggattcggatgtcagcagcgctgcagagctcctcgtgaagctgaaggag
acgccagatgatctcctccagctggatcccgaagctgacgacgccatggcgcctctaaca
ggaggttttgttgagctgtcgtttgccacttcgactcatccaaacttggtgccggaccat
cctcaggatctgtgcagtccccagctgagacagctcctctcgcccatcttcaaccccctc
actccaccttcatcatcatcatcatcatcaccctcctcacctgagccgagcccctgtgag
acggcggcgacggacaccggcaaggttaaaaagatccttgccttttgtccagacgatgct
caagagaaaggaggaccacaggaggcgatggatctggacatgttggctccttacatctcc
atggacgacgacttccagctgaccttactcaacacgttgcccgaggaagctgacaaaccc
tcggatgcgacgcctgcagcggcggcgagcaggaaacggacccataacccagatgaagag
atgccggcccagctgatggttcatgacaagagacagaaacacgatccttcctcaatagaa
gaggaacttcttctcagccacagattactgggctgtctggaggaagctgaccaatcggat
ctgaccctggacccgggcccgggcccgagaggctgcagtcagctgctcacagacagagac
cccgttttaggaggcatacagggcctctgtgatactgcagttctgatgagggacatattc
tcgggacttacacgaggccccccagacctctcgccacctctttcacctttgacctga
DBGET
integrated database retrieval system
