Brachyistius frenatus (kelp perch): 138633064
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Entry
138633064 CDS
T10614
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04517
IgSF CAM signaling
bfre04520
Adherens junction
bfre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138633064 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138633064 (afdna)
04530 Tight junction
138633064 (afdna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
138633064
NCBI-ProteinID:
XP_069575161
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISRPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKKEKKREKEFARIPDG
DEQAEDGENNRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGRPDS
GGTLRIYADSLKPNIPYKTILLSTRDTADFAVVEALEKYGLEKENPREYCIARQDDKSGK
EAILDDLECPLQIFRDWPADRGALVFQLKKRPPDYQGRKGRKVEDKGVRGKDSSLPPEKL
PYLVELSPGRGNHYAYYAYRHHEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQLLGPG
ILPHHCNLMHSEGMVTVTPHNPDADTFVDGQRVTETTVLRSGSTLQFGSAHVFKFVDPMF
DQGGKREPAAMMRTRHKSGSVPETTFDLHGDVHSGAALPTSKSSGKLEMERGMVKPMIRG
EQQDSRSQDISADRTELTLPAGIEFRDNSEDTFLSAIINYTNSSTVHFKLSPTYVLYMAC
RYVLSPTYRPDMSPSERTHKVIAIVNKMVSMMEGVIQEIPEGDQKQKNIAGALAFWMANA
SELLNFVKQDRDLSRVTLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEHNPQ
RPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDTESGLCCHYW
GAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTCFKLNS
LQLHALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQLPFLL
PEDGYSCDVVRSLPNGLQDFLDPLLQRGFCRLVPHPRSPGTWTVHFEGADCDSHFSAADS
SEMPMRKDPEVVTVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADVDGRLAAGD
QLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMARASDR
GREKNGKLRPKSEGFELYNSSVQNGSPESPQAGWDSYPEPKKMSGEDRLLKNRADHRSSP
NVANQSQSPAGKSVYPGGPGTKITSVSTGNLCADDEPSPPHPEAYPIPTQTYPREYFTIP
ASKSQDRVVGPGQVPSQHWQGMDDRERLPVVDSIHSNSMQRINHSQEELYPPPGSLRPDD
RMQQHYQPDYQLRDLDYQHRELDYQRGPPGGVLGPDHWAPQPQVSSSLESSTSSQEHLNF
SASSSSSNKTQNQKTGPGRWKTPNAPHAAPAHPAQPPSRSDLPPPPPPPPASYTDAYDPY
DPQPDLPLPPPPAAVTAVTAQQAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQ
IRANPVMPVQPHNNGGSVPPPHHQPPLPSVAPPQPYLPPQPQLPPSRPEKLASLPRSAVP
PPASASHPAGKSMDTVIRELLPQQQPRTIERRDLQYITISKEELTSSDSLSPDPWKRDAR
EKAEKQQQLHIVDLLDKEIQELQSKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEDEE
EEDDEDVDTMMIMQRLEAEKRARQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERMK
QEEERRWKEEERAKREAEEKRRQEEEYYTRLEAGRRRQHEEAERKLLTPDEPAGLYRPPL
PRDYQPPAPHNPTNTPPPPPQRNTSYLKTQVGSPDTIYTAKFVSYAGGDEEDEEDATSGG
GGGGVVQSGQVKLSATRKSYGDLPASSSSAASPGRGRPRPPPTARKPRPLSDGYFLSSSF
QPPLDNNNSNSTGPPLPAKPSSVPPGGFIQGFNSYTGNSAGVVGSGEVYKDPRDKWTKSQ
EQENSNPSGPPENLTFKERQRLFSQGKEVSNKVKASRKLMELENELNTKQ
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccggcccacggaggacctggagttccacggc
gtgatgcggttctacttccaggaccgggtcgccggcaacttcgccaccaagtgcatccga
gtctcgagcacggcgacaacgcaggacgtcatcgagacgttggccgagaagttccgaccg
gacatgaggatgctgtcctcgccgaaatactcgctgtacgaggtgcacgtcagcggagaa
gagcgtcagctggacctggacgagaagccgctcgtcgtccagctgaactggaacaaagac
gacagagaaggacgcttcgtcctgaagaacgagaacgacatcttgcccaagaagagccag
agtaacgggccggagaaggagaaggacggcgtgatccagaacttcaagaggactctgtcc
aagaaggagaagaagaaggagaagaagagggagaaggagttcgcccgcatccccgacgga
gacgagcaggcggaggacggggagaacaatcgcctggcggcggaggtttataaggacatg
ccggagaccagcttcaccaggaccatctccaaccccgaggtggtgatgaaaaggaggcgc
cagcagaaactggagaaacgcatgcaggagttcatgagcagcgacgggaggccggactca
ggcggcactttgaggatatacgccgacagcctgaagcccaacatcccctacaagaccatc
ctgctgtccaccagggacacggccgacttcgccgtggtggaggcgctggagaagtacggg
ctggagaaggagaacccccgggagtactgcatcgcccggcaagacgacaagtcgggcaag
gaggcgattctggacgatctggagtgtccgctgcagatcttcagggactggcctgctgac
agaggagcgttagtgttccagctaaaaaagagacctcccgactatcagggacggaaggga
cgcaaggtggaggacaagggcgtccgggggaaggacagctcgctgccgcccgagaaactg
ccttacctggtggagctgagcccagggcgagggaatcactatgcctactacgcctatcgg
caccacgaagacgggtcggactcgcgggacaaacccaagctgtaccggctccagcacagc
atcaccgaggtcggctcggactgcacggaggacggagccatccagctgctcggcccgggg
atcctgccccaccactgcaacctcatgcacagcgagggcatggtgacggtgacgccgcac
aaccccgacgccgacaccttcgtcgacggccagcgcgtcaccgagacgacggtgctgcgc
tcgggctccaccctccagttcggctccgcccatgtcttcaagttcgtggacccgatgttc
gaccagggcgggaagagggagcccgccgccatgatgaggacccggcacaagtccggcagc
gtaccagaaaccaccttcgaccttcacggagacgtccacagtggagctgccctgcccacc
agcaagagctcaggaaagctggagatggagcgagggatggtgaaacccatgatcagagga
gagcagcaggacagcaggtctcaggacatttcagcagaccgaacggagttgactcttcca
gccggcatcgagttcagagacaactccgaagacaccttcctctccgccatcatcaactac
accaacagctccaccgttcacttcaagctctcgcccacctacgtcctgtacatggcctgc
cgctacgtcctgtcgcccacctaccggcccgacatgtcgccgtcggagcgcacgcacaag
gtcatcgccatcgtcaacaagatggtgagcatgatggaaggagtcatccaggagattcct
gaaggggatcagaagcagaagaacatcgcgggagcgctggctttctggatggccaacgcc
tccgagctgctcaacttcgtcaagcaggaccgagacctgagtcgcgtcaccctggacgct
caggacatcctcgcccacctggtgcagatggccttcaagtacttggtccactgtctccag
gctgatctgaacaactacatgccggccttcctggacgaccccgaggagcataatcctcag
agaccgaagatcgaggacgtcctgcacacgctgacgggcgccatgtcgctgctgcggcgc
tgccgggtcaacgccgctctgaccatccagctcttctcgcagctcttccacttcatcaac
atgtggctcttcaacaagctggtgaccgacaccgagtcggggctctgctgccactactgg
ggggccatcctccgacagcagctcagccacatcgaggcctgggcagagaaacaggggctg
gagctcgccgctgactgccacctcagccggatagtgcaggccaccaccctgctgacgatg
gacaaatactccatgcaggacgtgcagaacatccacaacacctgcttcaagctcaactcg
ctgcagctgcacgcgctcatgaccaactaccactgcgcccccgacgagccgtacatcccg
ccggagctgatcgaccacgtggtggcggtggcggagaacacggcggacgagctggcgagg
agcgacggccgggaggtgcagctggaggaggacccggacctgcagctgcccttcctgctg
cccgaggacgggtactcctgcgacgtggtgcgcagcctccccaacggcctgcaggacttc
ctggacccgctgctgcagagaggtttttgcaggttggtgcctcacccacgctctcccggt
acctggaccgtccactttgaaggagctgactgcgacagccacttctctgctgctgacagc
tctgaaatgccaatgaggaaagacccggaggttgtcacggttaccctgaagaagcacaac
ggcatgggcctcagcatcgtggccgccaagggtgccggtcaggagaagctcggcatctac
atcaagtctgtcgtcaaaggcggcgcggccgacgtggacggccgtttggctgcaggcgac
cagctgctgagtgtcgacgggcgcagtctggtcggcctatcacaagagagggcggccgag
ctgatgacgaggacgggctcggttgtgactctggaagtcgccaagcagggagccatttac
cacggactggccacactcctcaaccagccgagccccatgatggcgagagcgtcggaccgt
ggccgcgagaagaacgggaagttgcgaccaaagagcgagggcttcgagttgtacaacagc
tcggtgcagaacggctctccggagagcccgcaggccggctgggactcgtaccccgaacca
aagaagatgagcggcgaggaccggctcctcaagaaccgggccgaccaccgctccagcccc
aacgtagccaatcaaagccagagtcccgccggtaaatcggtgtaccccggaggacccggc
accaagatcacctccgtctccaccggcaacctgtgtgcggacgatgagccctcccctccc
catccagaggcctaccccatccccacccagacctacccccgcgagtacttcaccatcccg
gcctccaagagccaggatcgggtggtgggtccgggacaggtgccgtcgcagcactggcag
ggcatggacgacagagagcgcctccctgtggtcgacagcatccacagcaacagcatgcag
cggatcaaccactcccaggaggagctctacccgccgccgggaagcctgaggcccgacgac
cgcatgcagcagcactaccagccggactaccagctccgggacctggactaccaacacaga
gagctggactaccagagaggtccgccgggaggtgtgttaggacccgaccactgggccccg
cagccgcaggtgtcctcctccctggagtcgtccacgtccagccaggagcacctcaacttc
tcggcctcgtcctcgtcctccaacaagacccagaaccagaagaccggcccgggccggtgg
aagacgcccaacgccccccacgccgcgccggcgcacccggcgcagcccccctcccgctcc
gacctgccccctccgccgcccccgcccccggcgtcctacaccgacgcctacgacccttac
gacccccagcccgacctgccgctcccgccgcctcccgccgcggtcaccgcggtaacggcc
cagcaggcggccgaccgcaagaagcgggaggagcagcagcgctggtatgagaaggagaag
gctcggctggaggaagaaagggagaggaagagacgggagcaggagaggaagttgggtcag
atccgggccaaccccgtcatgcccgtccagcctcacaacaacggagggtccgtgccccct
ccccaccaccagcccccgctgccctccgtggccccgccccagccctacctccccccgcag
ccccagctgcccccatccagaccggagaagctggccagcctgccgcggtcggccgtccct
ccgcctgccagtgcctcacaccccgccggtaaaagcatggacacggtgatcagggagctg
cttccgcagcagcagccgcgcaccatcgagaggcgagacctgcagtacatcaccatcagc
aaggaggagctgacgtccagcgacagcttgtctccggacccctggaagagggacgcccgc
gagaaggccgagaagcagcagcagcttcacatcgtcgacctgctggacaaagagatccag
gagctgcagtcgaagccggagcggacggcggaggagagcgaccgcctccggaagctgatg
ctggagtggcagttccagaagaggctgcaggagtccaagcagagcgacgaagacgaggag
gaggaggacgacgaggacgtggacaccatgatgatcatgcagaggctggaggccgagaag
agagccaggcagactgctgtcccagctatctctgttctagacttgttgcaggacgaggag
cgacggcgcaagcagcagctggaggagatccgtaagcgggaggcggaggagcgaatgaag
caggaggaggagaggaggtggaaggaggaggagcgagccaagcgagaggccgaggagaag
aggagacaggaggaggagtactacacccgcctggaggccgggcggcgccggcagcacgag
gaggccgagagaaagctgctgacgcccgacgagccggccggtctgtatcggcccccgctg
ccccgggactaccaaccccccgccccccacaaccctactaacacccccccgcccccgcct
cagagaaacacctcctacctcaaaacccaggtcggctcgcccgacaccatctacaccgcc
aagttcgtctcctacgcgggcggcgacgaggaggacgaggaggacgccaccagcggcggc
ggaggaggcggcgtcgtccaatcaggtcaggtgaagctgtcggcgacccggaagtcgtac
ggcgacctcccggcctcctcctcctccgccgcctcgcccggccgcggcaggcctcggccg
ccgcccactgcgcgcaagccccgcccgctttccgacggctacttcctgtcgagctcgttc
cagccgccgctcgacaacaacaactccaacagtacaggcccccccctccccgccaaaccc
agctccgtgcccccggggggctttatccaaggatttaactcgtacactggaaactcggca
ggagttgtaggatcgggagaagtctacaaggacccgcgggacaaatggacgaagagtcag
gagcaggagaactcgaaccccagcggcccgccggagaatttgaccttcaaggagcgccag
cgtctcttctctcaggggaaggaggtttccaacaaggtcaaagcctctcgcaaactcatg
gagctggagaacgagctcaacaccaagcagtag
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integrated database retrieval system