Brachyistius frenatus (kelp perch): 138633336
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Entry
138633336 CDS
T10614
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre02010
ABC transporters
bfre04148
Efferocytosis
Brite
Transporters [BR:
bfre02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138633336 (abca1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138633336
NCBI-ProteinID:
XP_069575606
LinkDB
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Position
Unknown
AA seq
2163 aa
AA seq
DB search
MSVFTQLHLLLWKNFTYRRRQTLQLLAEILWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLEGFKELDRALKGLQASRSGFKLKHFLRDKESLSTFLQKNASLDEHSVEQIREADVHLG
QVLLRGFGVHLRDMCPRKDGTQSLEDFVTISDQQVSMLVQEIICQAPPIWLNHAEEHFLN
NLDFLKPIQRDVRSDPEAVQQVAKATNNLLDSLGSLAVELASMKSWIDLRNEIVFLTHNA
TSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEAALYDNSSTP
YCNSLVRDMDSNPMSRMIWTALKPLLMGKILYTPHTPATQRVIHEVNRTFQELGVFRDLG
GMWEEMRPKVWSFMESSEQMDLLRTLLKNNVTAGFFHTQLADTDWTVADVSDFLSKRVED
RQLGGALTWREVFNETDQAIVSISRFMECVNLDKLEPVSSEEGLINQSMLLLEDRKFWAG
IVFPDIAPNATELPPQLSYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYMWGGFSY
LQDVIEQGIIRAMTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
LKSVVYEKEARLKETMRIMGLDNGILWFSWFLSSLVPLLISAGLLVLLLKTGNLLPYSDP
GVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGA
KVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIILMYFDSFLY
GVLTWYIEAVFPGQYGIPRPWFFPFTKSYWFGEKDGKANKAPVSRKGNPGAVCIEEEPAH
LEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGRDIRTDLSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEEEVKRETEQ
ILQDTGLPHKRNSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LNYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKDP
EPSPSSCRNSSSTVSFTKKEEECASVSSSDAGLGSEHESEAATIVNGPAASICYVPFVPP
DASLVSGVIMHHVPAARLVEDLGHELTYVLPYCAAKDGAFVELFKDLDVKLSDLGISSYG
VSDTTLEEIFLKVAKDNGVDTEVPSDGTLPVRRRRRTHAFGGGDHQSCLRPLTEDDNNDN
NDSDGDPDCRETDWLSSTDGKGSSQVKGWSLKRQQFVALMWKRFLYARRSRKGFFAQIVL
PAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDPNMQKLLDSLLDAPG
FGTRCMDGHPIPEAPCTMGDEDWHTPDVPESVQRLFSLGNWTMDDPSPACFCSYNGYKKM
LPDCPAGAGGLPPPEMKMSANDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYG
GFSLGARSTQVLPPANEVDDAIERVRKIFELQKGAAADRFLESLSGFINGLDTKNNVKIW
FNNKGWHSIGSFINVMNNGILRAHLPPGTDPTQYGIRAFNHPLNLTKEQLSQVALVTTSV
DVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFTWDMCNYVVP
ATLVVLIFICFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSV
NILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALE
RFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPRSVSALTKLGPLGEE
DEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAG
KTTTFKMLTGDTVVTSGEAFLAGKSILREIDEVHHNMGYCPQFDAINELLTGREHLELYA
ILRGVPEKEVCDVAEWAVRKLSLLKYADKAAGSYSGGNMRKLSTAMSLIGAPPVVFLDEP
TTGMDPKARRALWSVIHSVLKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHL
KNR
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttcacgcagctccatctgctgctgtggaagaacttcacctacagacgacgg
cagacgctccagctgctggcagagatcctctggccgctcttcatcttcttcatcctcatc
gccgtgcggctcaactatcctccatacgaacagcatgagtgtcatttccccaacaaggcg
atgccatcagccggcacgttgccatggatacaggggattctctgcaatgccaacaaccca
tgtttcagacacccgacgccaggcgagtctccgggcgtcgtcggcaattttaacgactcc
ataatttcccgccttttttcagacgccaagaagattctgctgtacagtcagaatgacaag
aacctggagggcttcaaggagctggatcgggcactgaaggggctgcaggccagccgctca
ggcttcaagttaaaacacttcctgcgagacaaagagagtttgtcgacgttcctgcagaag
aacgcgtcgctggatgaacacagcgtggaacagatccgagaggccgacgtccacctgggg
caggtgctcctccgagggttcggcgtccacctccgggacatgtgtcccaggaaggacggc
acgcagagtctggaggacttcgtcaccatctcagaccaacaggtgtccatgctggtacag
gaaatcatctgtcaggccccgcccatctggttgaaccacgctgaggagcacttcctgaac
aacctggacttcctcaaaccgatccagagggacgtcaggtctgaccccgaggcggtccaa
caggtcgccaaggcaaccaacaacctgttggacagtctgggttccctggcagtggagctg
gccagcatgaagagctggatcgacctgcgtaatgagatcgttttcctgacgcacaacgcc
acgtcgtcccccagtgccatgtaccaggcggtgtcccgcatcgtgtgtggacatccggag
ggcggcggcctgcagatcaagtccctcaactggtacgaggacagcaactacaaggctctg
tttggaaaccacaacagcagcgaggacgaggccgcactctacgacaactcctccactccg
tactgtaacagcctggtgagagacatggactccaacccgatgtccaggatgatctggacg
gcgctgaagcctcttctgatggggaagatcctgtacaccccccacacccccgccacgcag
agggtcatccacgaggtgaaccggaccttccaggagctcggtgtgttcagggacctgggt
ggcatgtgggaggagatgagacccaaagtgtggagcttcatggagagcagcgagcagatg
gacctgctccggacgctgctgaagaacaacgtcaccgccggcttcttccacacacagctg
gccgacaccgactggaccgtcgctgacgtctccgacttcctgtccaagcgggtggaggac
cggcagctgggcggcgccctcacctggagggaggtgttcaatgagaccgaccaggccatc
gtgagcatctcccgcttcatggagtgtgtgaacctggataaactggagccggtctccagc
gaggagggtctcatcaaccagtccatgctgctgctggaggacaggaagttctgggccggc
atcgtgttccccgacatcgcgcccaatgccacagagctgccgccgcaactcagctacaag
atccggatggacatcgacaacgtggagcgaaccaacaagatcaaagacgcgtactgggac
ccgggtcctcgcgccgacccgttcgaggacatgcggtacatgtggggcgggttctcgtac
ctgcaggacgtcatcgagcagggcatcatccgggctatgacgggcaccaaggagaagaca
ggcgtgtacatccagcagatgccgtacccgtgctacgtcgacgacatcttcctgcgggtg
atgagccgctccatgccgctcttcatgacgctggcctggatgtactcggtggccatcatc
ctgaagagcgtggtgtatgagaaggaggcgaggctgaaggagaccatgaggatcatgggg
ctggacaacggcatcctgtggttcagctggttcctcagcagcctggttcctctgctgatc
agcgccgggctgcttgttctgctgctcaagacggggaacctgctgccgtacagcgaccct
ggcgtggtcttcctcttcctggggtccttcgccgtggtgaccatcatgcagtgtttcctc
atcagcacggcgttcgcccgcgccaacctggcggccgcctgcggggggatcatctacttc
accctctacctgccctacgtgctctgcgtcgcctggcaggactacatcggcttcggagcc
aaagtttttgcgagcctcctgtccccggtggcgtttggcttcggctgcgagtatttcgcc
ctgttcgaggagcagggagtcggcatccagtggaagaacctggtgtccagtcctctggag
gaggacgacttcagcctccgcaccgccatcatcctaatgtactttgactccttcctgtac
ggagtcctcacctggtacatcgaggccgtgttcccaggtcagtacgggatcccgcggccg
tggttcttccccttcaccaagtcctattggttcggagaaaaggacgggaaggccaacaaa
gcccctgtgagccggaaaggaaaccccggagcggtgtgtatcgaggaggagccggctcac
ctggagcccggagtctacatcgagaacctggtgaaggtctaccgtcacggtaagaaactg
gcggtggacggacttacacttggcttctacgagggacaaatcacgtccttcctgggacac
aacggggccgggaaaaccaccaccatgtccatcctgaccggactcttcccccccacctcc
ggtaccgcctacatcttgggcagagacatccggacggacctgagcgccatccggcagagt
ctgggagtctgtccgcagcacaacgtcctcttcagcatgctgacggtggaggagcacatc
tggttctacggccggctcaaaggcttgtcggaggaggaggtcaaaagggagaccgagcag
atcctgcaggacacggggctgccgcacaaacgcaactccaggaccagcactctgtcgggg
ggcatgcagaggaagctgtcggtggcgcttgccttcgtaggggggtcgaaggtcgtgatc
ctggacgagcccacggccggcgtcgacccgtacgctcgcagaggaatctgggacctgctg
ctgaactaccgacagggtcggaccatcattctgtccacccaccacatggacgaggcggac
atcctgggagaccgcatcgccatcatctcccatgggaagctgtgctgtgtcggctcgtct
ttgtacctgaagaaccagctggggaccggctactacctgaccctggtgaaaaaagatccg
gagccgtcccccagttcctgcaggaactcatccagcacagtgtccttcaccaagaaggag
gaggagtgcgcctcggtcagcagcagcgacgccggacttggcagcgaacatgaaagtgag
gcagccaccatcgtaaacggtcccgccgcgtccatctgctacgtccccttcgtccccccg
gacgcgtctctggtctcgggtgtgatcatgcatcatgtccccgctgcccgcctggtggag
gacctgggacacgagctgacctacgtcctgccatactgcgccgccaaggacggagccttc
gtggagctcttcaaggacctggacgtgaagctgagcgacctcggcatctccagctatgga
gtgtccgacaccacgctggaggagattttcctcaaagtggccaaagataatggagtcgac
actgaagtgccctcagatgggacacttcctgttcggaggcggaggaggactcacgccttc
ggtggaggagatcatcagagctgcctgagaccgttaacagaggacgacaacaacgacaac
aatgactctgacggagaccctgactgcagggagacggactggctgagctctactgatggt
aaagggtcgtctcaggtaaaggggtggagcctgaagaggcagcagtttgtggctctgatg
tggaaacggtttctgtacgcgcgacgctccaggaagggcttcttcgctcagattgtcctt
cctgccgtcttcgtctgcatcgctctcgtcttcagtctcattgtccctccgtttggaaaa
tatcccagtttggagctgcagccgtggatgtacgaggaccaggtcaccttcatcagtgac
gacgcccccggagaccccaacatgcagaagttactggactctctgttggacgctccgggc
ttcgggacgcgctgcatggatggacatcccatcccagaggctccgtgtacgatgggggat
gaggactggcacactcctgacgtccctgaaagtgtccagcggctgttcagcttggggaac
tggaccatggacgatccgtctccggcctgtttctgcagctacaacggatataaaaagatg
ctgccggactgtcctgctggagccggaggtctgcccccccccgagatgaagatgagcgcc
aacgacaccctgcagaacctgacgggccggaacatctccgactacctggtgaagacctac
gctcagatcatcggcaagagcttgaagaacaaagtgtgggtgaatgaattcaggtacgga
ggcttctcattgggcgccaggagcactcaggtcctcccaccagccaacgaggttgacgac
gccatcgaaagagttcgaaagatctttgagctgcagaagggagctgctgctgatcgattc
ctcgagagtctgtccggcttcatcaacggtctggacaccaaaaacaacgtcaagatctgg
ttcaacaacaaaggctggcacagcatcggatccttcatcaacgtgatgaacaacgggatc
ctcagagctcacttgccaccaggtaccgacccgacccagtacggaatcagagccttcaac
cacccgctgaacctgaccaaggagcagctgtcccaggtggccctggtaacgacctccgtg
gacgtcctggtgtccatctgtgtgatcttcgccatgtccttcgtcccggccagcttcgta
gtcttcctcatccaggagagagtcagtaaagccaaacacatgcagttcatcagcggagtg
cagccgctgctctactgggtggccaacttcacctgggatatgtgtaactacgttgtcccg
gcaacgttggtcgtcctcatcttcatctgtttccaacaaaaggcctacgtgtcctccacc
aacctgccggtcctcgctctgctgctgctgctctacggctggtccatcacccccctcatg
tatcccgcctccttcttctttaagatccccagcacggcgtacgtcgtcctcaccagcgtc
aacatcctcatcggcatcaacggcagcatctccaccttcgtcatggagctgttcgggaac
aacgagatcggaggaatcaatgacatcctgaagaacgtgcttctcatcttccctcacttc
tgtctcggtcgaggactcatcgacatggtgaagaaccaggcaatggccgacgccctcgag
agattcggtgagaaccggttccgttctcctctggagtgggacatggtggggaagaacctg
ttcgccatggctgtggagggagttgtgttcttcatcatcaccgtcctcatccagtaccgg
ttctgcatcaaacccagatcggtcagcgccctgacgaagctcggtcctctgggtgaggag
gacgaggacgtggcccgggagagacagcggatcgtccatggtctgggacacggagacatc
ctggagctacgtcaactcaccaaggtgttcaagaggaagcagaagccagcggtggaccgc
ctgtgtgtgggaatccctcctggagagtgtttcggcctgctcggtgtgaacggcgccggg
aagacgaccaccttcaagatgctgaccggagacacggtggtgaccagcggggaggccttc
ctggccgggaagagcatcctgcgggagatcgacgaggtccaccacaacatgggctactgc
ccgcagttcgacgccatcaacgagctgctgacggggcgcgaacacctggagctgtacgcc
atcctcaggggcgtccccgagaaggaagtgtgtgacgtggcagagtgggccgtcaggaag
ttgagtctgctgaagtacgctgataaagcagcaggaagttacagcggcgggaacatgagg
aagctgtccaccgccatgtctctgattggagcgcccccggtggtcttcctggacgagccc
acgactggcatggaccccaaggcccgccgcgccctctggagcgtcatccacagcgtcctc
aaagagggacgcagcgtcgtcctcacatcacatagcatggaggagtgtgaggctttgtgc
accaggatggccatcatggtgaacggcaggttcagatgtctcggcagcgtccaacacctg
aagaacaggtaa
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integrated database retrieval system
