Brachyistius frenatus (kelp perch): 138633352
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Entry
138633352 CDS
T10614
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04010
MAPK signaling pathway
bfre04210
Apoptosis
bfre04218
Cellular senescence
bfre04620
Toll-like receptor signaling pathway
bfre04621
NOD-like receptor signaling pathway
bfre04622
RIG-I-like receptor signaling pathway
bfre04623
Cytosolic DNA-sensing pathway
bfre04625
C-type lectin receptor signaling pathway
bfre04920
Adipocytokine signaling pathway
bfre05132
Salmonella infection
bfre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138633352 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138633352 (nfkb1)
04218 Cellular senescence
138633352 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138633352 (nfkb1)
04621 NOD-like receptor signaling pathway
138633352 (nfkb1)
04622 RIG-I-like receptor signaling pathway
138633352 (nfkb1)
04623 Cytosolic DNA-sensing pathway
138633352 (nfkb1)
04625 C-type lectin receptor signaling pathway
138633352 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138633352 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138633352 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
138633352 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138633352 (nfkb1)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
138633352 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
138633352
NCBI-ProteinID:
XP_069575637
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MAGDDHYLHTSNQIFDNIMIDPSWEFSHFSAMSQTASLRTVDGPFLQIVEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNRKTYPAVKISNYQGQARVVVQLVTALTPLPQLHAHSLVGKQ
CDKGICIADLQSKDCSISFPNLGILHVTKKNVAKTLEERMVEAFRMGYNCGVSIHPEIDT
QQGEVRVPRDLSDHQRGMISSAACLQAKDMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSE
PIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDSGITWEAL
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPTFQDFSGHGGGGGGLYRGGGGLYRGGGGGGGPAAGGGPGSAGGGYFQGF
TTYNYGGGGAGGGAGGGVGGGAGGGAGGGAGGGGGFSTGYSAGLGGGGAGRGIKHASEGE
DSAVDSDLGDDPASARSGGLEVGEITEEGGVAVEPDADREERLVHLINRHLEALFQYSVT
GDSAYLLAPQRPLMATQDEDGDTGLHLAVLHSQQEALKSLTQVVSALPGEEVLNMRNHLY
QTPLHLAVITQQKEAVEVLLLAGADPSLTDRHGNTALHLAAQQEGGGLVQFLLQHREMRE
LLDHTMVTGLCAIHLAVLANQLSSLRELLEGGADVEAAERSCGRTALHLATEIDNVSLAG
CLLLEGNAKVDCCTFNGSTPLHTAAGRGSVKLTALLMAAGADPQKENFEPLFFREDECCD
EEEEDEGYVPGTSPLSMAATSQVLDLLNGKEYEPKTPHRAVILPQGDLASLDVEVKQAVC
RALESEGFWENLAHSLGLGILNTAFRLSPSPAKTLLDSYEVSGGTVRDLLAGLRSVGECR
TLSVLEEALRHHQKTPAANQTTGEPLSAPIQDLKADVRIDSGVCDSGVELSTA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagacgaccactacctgcacacgtccaaccagatcttcgacaacatcatgatc
gacccgtcatgggagttttcacatttctctgcgatgtctcagacggcgtccctgcggaca
gtggacggaccgttcctgcagattgtggagcagcccaaacagcgcggcttcaggttcagg
tacggctgtgaaggtccgtctcacggaggtctgcctggagcctccagcgagaagaacagg
aagacctaccctgctgtcaagatctctaactatcagggtcaggcccgggtggtggtccag
ctggtgacggcgctgactcctcttcctcagctgcacgcccacagtctggtggggaaacag
tgcgacaaaggaatctgcatcgctgacctacagtccaaagactgcagcatcagttttccc
aacctggggattctccacgtgacaaagaagaacgtggcaaagactctggaggagcgcatg
gtggaggccttcaggatgggatacaactgtggagtctccatccaccccgagatcgacacc
cagcagggggaggtccgagtcccccgcgacctcagcgaccaccaacgcggtatgatcagc
agtgctgcgtgtctccaggccaaagatatggacctcagcgtggtgcgtctgatgttcacg
gcgttcctccccgacagtgacggaggtttctccaggcggttggagccggtggtgtcagag
cccatctacgacagcaaggctccgaacgcctccaacctgaagatcgtgaggatggatcgg
accgccggctgcgtgaccggaggagaggaggtctacctgctctgtgacaaggtccagaaa
gatgatatccaggtccggttctacgaggaggacgactcggggatcacctgggaggctctg
ggagacttctctcccacagacgtccacagacagttcgccatcgtcttcaagactccgaag
tatcgagatcagaacctgcaaaaaccgacgtctgtgtttgtccagctgaagaggaagtct
gacaacgaaacgagcgagcccaaacccttcacctaccaccctcagatcatagacaaggag
gaggtgcagaggaagagacaaaagacgctgccgaccttccaagacttcagcggtcatgga
ggaggaggaggaggtctgtaccgaggaggaggaggtctgtaccgaggaggaggaggagga
ggaggtccagctgcaggaggaggacctggatctgcaggaggaggatacttccagggcttc
accacctacaactatggaggagggggagcaggaggaggagcaggagggggagtaggaggg
ggagcaggaggaggagcaggaggaggagcaggaggaggaggaggtttctctacaggatac
tcagctggtctgggaggaggaggagcaggaagaggcatcaaacatgcctcggagggcgag
gactcagcagtcgacagcgatctgggcgatgacccggcgtcggcccggtcaggaggcctg
gaggtgggggagattacggaggagggaggggtcgctgtggagcccgacgcagacagagag
gagcgcttggttcacctgatcaaccgacacctggaggctctcttccagtactcagtgaca
ggtgactcagcgtacctgctggctccacagcgccccctgatggccactcaggatgaagac
ggagacactgggctccacctggccgtcctccacagccagcaggaggcgctgaagagtctg
actcaggtggtgtctgctcttcctggagaggaggtgctcaacatgaggaaccacctgtac
cagactcctttgcacctggcggtgatcactcagcagaaagaggcggtggaagtgctgcta
ttggccggcgctgacccatctctgactgatcgtcatggcaacacggcgctccacctggca
gcccagcaggaaggaggagggctggtccagtttttactacaacacagagagatgagagaa
ctgctggaccacaccatggttacaggtttgtgtgcgatccacctggcagttctggccaat
cagctgtcgtctctccgggagctgctggaaggcggagctgacgtggaggcggcggagcgc
agctgtggacggaccgccctccacctcgccaccgagattgacaatgtatctctggccggc
tgcctgctgctggagggaaacgccaaggtggactgctgcaccttcaatggttccaccccc
ctccacaccgctgcagggcggggctccgtcaagctcactgctctcctgatggctgcaggt
gcggaccctcagaaggagaactttgagccactgttcttcagggaggacgagtgctgtgat
gaagaggaggaggatgaaggctacgtcccaggaacctctcctctcagcatggccgccacc
tctcaggtcctggatcttctgaacggtaaagagtacgaacctaaaactcctcacagagcc
gtcatccttcctcaaggcgacctggcgagcctggacgtggaggtgaagcaggcggtgtgt
cgtgctctggagagtgaaggattctgggagaacctggctcacagtctgggactggggatc
ctcaacacggccttcagactgagcccttcccccgccaagaccctgctggacagctacgag
gtctcgggggggacggtccgggacctgctggctggtctgaggtcggtcggggagtgcaga
acgctgagtgtcctggaggaggcgctgcgtcaccaccagaagactccagcagccaatcag
acgacaggcgagcctctaagcgctccgattcaggacctgaaggcggacgttcggatcgac
agcggggtctgtgacagcggggtggagctctccacggcgtaa
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