Brachyistius frenatus (kelp perch): 138633423
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Entry
138633423 CDS
T10614
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
138633423 (tdrd12)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138633423 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138633423
NCBI-ProteinID:
XP_069575745
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Position
Unknown
AA seq
1399 aa
AA seq
DB search
MLKISILKVDNPSCLWGRVVRGPGNDTDTTEDYNNLLAQMNLFYHDVTRDLHRLKPNVLE
EGQVCVLYWEVIKSWCRAVVESIFMDSISCQARCLLVDYGERLIVPSDQIRVVMQNFLQL
PFWVRKFHLAGIEPTTMHVSLYEETAELIPSRQWDSSATLYLHNLLQASTQTEAVLRESE
PESTSVNLYLTVGNIKICVNDELVAKKFAYYTRASSDCGGLDEGDRLPVMLSSSILTLTV
STASNKLTAQNQPSAVTSQSWATASAGDWLTAASAPQSQWHGLVTSEGDQRSKVTGEPPS
PSSQSSNGLDAAAPESDSSEDTDSSLAAALAKNLSLFRFLKFLNPGSSYQQTALGAGLNE
ELNDCRPPETTAASNTLMPLHKNEPVTPDEQASIHTSNQKRGAEDLLESSQVEHLAAGDS
SSTSRSVASGLAVETQRTEEDWACSRLLEWLNPKPLNRDPDAADDVAAPSDPRRSGILVH
SALPVEPCKSLQDAPITEALRSVLRRKQYGSLSPADRYGWPAVARGCNTVIVSHNADRPL
SYLTPLLTHILLNSIFTSPTSSSGPIAVLLCPGWEKVQAVYDLLEESKVAHILHPVSVLL
GIGKDEARAVKIPKNCLLLVTTPFSLVRLLSCHCFLFLRLYHLLLDEADQLFTLAPDEMT
TILQHFQKVTSSEQKASCPQQLVAMAKRWTSHMEGLLANHMPYPCVVITVPEEAALYGNV
QQVILMTLESSKISVLLGALDFNTDVGQKTLIVANSVQEVEDVFKAVSNKSAFCLKTHEG
LTHQFDFVIQQWRKDIGPGTHVILVTTNECLKCLGIRDATSVVHYGFPTSPKLFGSRLFC
MAANFRNLSERHQTESCPRVTRSVLLISERNARHIVGVLRYLGRSDAPLPSELLSFAQGV
HAAREDQKTNRPLCSCLKSLGVCRDSSVCPDRHRFISKLDQSELPAAGVIEVVPLFIKTA
SVFYGRIVRKEDGGFDIMASEMASYYADKKPAAQELLDGGLYAVQEDEVFHRVRVLSVPD
RRGRLFFSVFVRFIDVGKEEEVKSHQVLQLPEQFHSLPGQAVEIIVCRVKPVDAETDWHP
KVTRAISQKIHGLQHRARAVLSLGNTVFLDPMVRLTQVPGMKTIINEYSVQSEILNTGMG
VSNPEHLELLKALCQEGAAGSGRQAGHAPADGLPSLEVRIKAQEDVLAEAFRVAKVGTLA
DPDLPHLEPCEPLSPSTNQNLLQAPPAPELHPDPPCDQKSQLEKQTDDGRTNSHPADLKS
AEQMESFHPQVRWYQTSDSAIVTVKLTNPERQRCHFYPDRVVYSGSVDGRSYRADLQLHQ
NIAADHCCWEMKSNEPVLKLVKQQRGHWERFLRNKNIFVSYDMEHIDEEEDGASNGVWFV
ENTGKDNWYVNSESGSESD
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatatccattttgaaggtggacaacccgtcgtgcctctggggcagggtggtt
cggggtcccggcaacgacaccgacaccacagaggattacaacaacctgctggctcagatg
aacctcttctaccacgacgtcacccgggacctgcatcgactgaagcccaacgtgttggag
gagggacaggtgtgtgtgttgtactgggaggtgattaagtcatggtgtcgggcggtggtg
gagtcgatcttcatggactcgatatcctgtcaggctcgctgcctcctggtcgactacgga
gaacgactcattgttccctcagaccagatccgagtggtgatgcagaacttcctgcagctt
cctttctgggtgaggaagttccacctggcaggaattgaaccaacaactatgcatgtttct
ttatacgaggagacggcagagctcattccatccaggcagtgggacagctcagcaacactc
tacctgcacaacctgctgcaagcgtcgactcagacagaagctgtcctgcgtgaatcagag
ccagagtccacctccgttaatctctacctgaccgtcggcaacatcaagatctgtgtgaac
gacgagttggttgcaaagaagtttgcatattacacccgagcgtcttctgactgtggcggc
ctggacgagggggaccgacttcctgtcatgttgtcctccagcattttaaccctgactgtc
tccacagcctccaacaagctgacagcacaaaaccaaccatctgctgtgacatcacagagt
tgggcgacagcctctgcgggggattggctgacggctgcctctgcacctcagagccaatgg
catggcctggtgacctctgagggagatcagaggtcaaaggtcacgggagaaccaccgtct
ccaagcagccaatccagcaatggtttggacgctgctgctccagagagtgactcttcagag
gacaccgactcgtctctggctgcagctctggccaaaaacctgagtctgttcaggttcctg
aagttcctgaatcctggcagcagctaccagcagacagcactcggtgccggtctgaatgaa
gagttgaatgactgtcgacctccggagacgactgcagcctccaatacattaatgccgtta
cacaagaatgagccagtaacccccgacgagcaagcatcgatccatacgagcaatcaaaaa
cgtggagcggaagatctccttgagagcagtcaggttgaacatctggcagctggagattca
agcagtaccagtaggtcggtagcgtccggactagctgtggagacccagaggactgaggag
gactgggcctgttcacgcctgctggagtggttgaacccaaagcctctgaaccgggatcct
gacgctgcagacgacgtggcggctcccagtgatcccaggaggagtggcatcctggtgcac
tcggccctcccggtggagccctgcaagagcctgcaggacgcccccatcacagaggctctc
cgctcggtgttgcggaggaagcagtacggctcgttgtctccagctgaccgttacggctgg
ccagccgtggctcgaggatgcaacaccgtaatcgtctcccacaacgctgaccggccgctc
agctacctcaccccgctcctcacccacatcctcctcaactccatcttcacctcccccacc
tccagctcagggcccatagcggtgctgctctgtccaggctgggagaaggtgcaggcagtg
tacgacctgctggaggagagtaaagtcgcccacatcctccaccccgtcagcgtgctgctg
ggcatcggcaaggacgaggccagggccgtcaagatccctaaaaactgcctgctgttagtg
accactcctttctccctggtccgtctgctgtcttgtcactgcttcctgttcctccggctg
taccacctgctgctggacgaggctgaccagctctttactctcgctcccgacgagatgaca
accatcttgcagcattttcagaaagtgacttccagcgagcagaaagcttcctgtcctcag
cagctggttgccatggcgaaaagatggaccagtcacatggagggtttgttagccaatcac
atgccgtacccctgcgttgtcataactgtccctgaagaagctgctctctatgggaacgtt
cagcaggtcatcctcatgactctggagagcagtaagatctcagtgctgttgggtgcactc
gatttcaacaccgatgttggccagaagactctgattgtagcgaactcggttcaggaggtt
gaagacgtgttcaaggctgtgagcaacaaatcagctttctgcctcaagacccacgagggg
ttaactcaccagttcgacttcgtcatccagcagtggaggaaagacatcggccccggcact
catgttattctggtgaccaccaacgagtgtctgaagtgtctgggcatcagagatgctact
agtgtcgtccactacggtttccccacttctcccaaactgttcggcagccgactcttctgc
atggctgcgaacttccgaaacctctcagaacgacatcaaacggagagctgccctcgtgtc
accagatcagtgctgctgatctcggagaggaacgcccgccatattgttggcgtgctgcga
tacctgggacggtccgacgccccgctgccctctgagctgctgtccttcgctcagggcgtc
cacgccgcccgggaagaccagaagaccaaccgacctctctgcagctgcctgaagagcctc
ggagtctgcagagacagcagtgtgtgtcccgaccgtcacagattcatttccaagctggat
cagtctgagctccctgcagctggagtcattgaggtcgtcccgctcttcatcaaaacggct
tcggtcttctacggtcggatcgtcaggaaggaggacggcggtttcgacataatggcctct
gagatggcttcttactacgctgacaagaaacctgcagcccaggagctgctggatggaggc
ctgtacgccgtgcaggaggacgaggtcttccacagggtgagggtcctctctgtgcccgac
agaaggggccggctgtttttcagtgtcttcgttcggttcatcgacgtggggaaagaggag
gaggtgaaatcccatcaggtccttcagctgccggagcagtttcactccctgcctggccag
gccgtggagatcatcgtctgccgggtgaagcctgtcgatgccgagaccgactggcacccc
aaggtcaccagagcgatcagccagaagatccacggtctgcagcatcgagcccgagcagtt
ctcagtctgggaaacaccgtttttcttgatccgatggtccgactcacccaggtgccaggt
atgaaaactatcatcaatgaatacagcgtgcagtcagagattctgaacacggggatggga
gtcagcaacccggagcatctggagctgctgaaggctctgtgtcaggagggagcggctggc
agcggcaggcaggcgggacacgcgccggcggacggtttgccgtctctggaggtcagaatc
aaagctcaggaagacgttctggctgaagccttcagagtcgccaaagttgggacgctcgct
gatccagaccttcctcacctcgagccatgtgagcctctcagtccatcaacaaaccagaac
ctgctccaagcaccaccagcacctgaactccacccggacccaccttgtgatcagaaatct
cagctggagaagcagactgatgacggacggacaaacagccaccctgctgacctgaagtca
gctgagcagatggagagtttccaccctcaggtccgctggtatcagacgtccgactcggcg
atcgtaacggtgaagctgacgaacccggagcgtcagcgctgccacttctaccccgacaga
gtcgtctacagtggcagcgtggacggtcggtcctacagagccgacctgcagctgcaccag
aacatcgcagctgaccactgctgctgggaaatgaagtccaacgagccggttctgaagctg
gtcaaacagcagcggggacactgggagagattcctcaggaacaagaatatttttgtgagt
tatgacatggagcacattgatgaggaggaagatggagcatcaaatggtgtttggtttgtg
gagaacacaggaaaagacaactggtacgtcaactcagagagcggcagtgagagtgactga
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