Brachyistius frenatus (kelp perch): 138633651
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Entry
138633651 CDS
T10614
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03030
DNA replication
bfre03420
Nucleotide excision repair
bfre03430
Mismatch repair
bfre03440
Homologous recombination
bfre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138633651
03420 Nucleotide excision repair
138633651
03430 Mismatch repair
138633651
03440 Homologous recombination
138633651
03460 Fanconi anemia pathway
138633651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138633651
03032 DNA replication proteins [BR:
bfre03032
]
138633651
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138633651
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138633651
DNA replication proteins [BR:
bfre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138633651
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138633651
MMR (mismatch excision repair)
138633651
DSBR (double strand breaks repair)
HR (homologous recombination)
138633651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Extensin_1
DUF223
CDC24_OB3
Arb2
IBR
Pox_vIL-18BP
Motif
Other DBs
NCBI-GeneID:
138633651
NCBI-ProteinID:
XP_069576119
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MSAALTRGAIEALFKGSPVSNPVLQLLNIRKISNASGPTRFRLMMSDGQHSLTSFLLATQ
LNNLPEENLLVPNCVCLLKRTLTNTLADGRHVVVVMDMEILQSEEETGGQIGNPTPYNTE
GKKLSPQKMSSSTSEPASSPSAAAPGSSYGNNNNSSEFLSAPCGRGFMGKASPMKTSPMK
ASPMKVSPMKASPMKASPMKASPMKASPMKASPMKASPMKTSPMKASPMKASSPSSTNIM
PIANLNPYQSKWTIRARVTNKASIRTWSNSRGSGKLFSFEIVDESGEIKITAFNNEVDKF
FSLVEQGKVYYISKATLKVANKQYTTLKNDYEITLNTHSSIVPCNDSESIPTAHCDFVPI
AELENRDKDAIIDVIGVCKSAEDVTRIVTKTSREVSKRALHLMDTSGKEVTVTLWAEAAE
KFDGSGQPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDREGYAVNSQS
LTETRATGGGSQMNWKMLSDIKNEAMGQGEKADYFSCVATVLYIRRENCLYQACPSADCN
KKVIDQQNGQYRCEKCNREFPNFKYRLLLSANLADSGDNQWVTCFQETAEVLLGHSAETL
GQLRDTDEAAFDEVFQKANFTTHIFKNRVKLETYNDESRVKVTVMEIQPVDHREYSRRLL
RNIHRWAS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcactcacacggggggcgattgaagccctgttcaaaggctcaccggtgagc
aatcccgtcctgcagctgctgaacatccgtaagatcagtaatgcctcagggccaaccagg
tttcggcttatgatgagtgacggtcagcactctttgacttctttcctgctggccacccag
ttgaacaatctcccagaagagaacctcctggtaccaaactgcgtgtgtcttttgaagaga
accctcaccaacacattggcagatggcaggcatgtggtggttgtgatggacatggagata
ttgcaatctgaagaggaaactggaggacagattgggaatcccactccatataatacggag
ggtaagaagttatcgccacaaaagatgtcatcaagcacctctgagccagcatcctctcca
tctgccgcagcaccaggatcttcctatgggaacaacaacaacagcagtgagttcctttct
gctccctgtggaagaggttttatgggaaaggcttcacccatgaagacctcacccatgaag
gcttcacccatgaaagtctcacccatgaaagcctcacccatgaaagcctcacccatgaaa
gcctcacccatgaaggcctcacccatgaaggcctcacccatgaaggcctcacccatgaag
acttcacccatgaaggcttcacccatgaaggcctccagtccttcttcaacaaatataatg
cctattgcaaacctcaacccctaccaaagcaagtggactatcagagccagagtgaccaac
aaggccagtatccgtacctggagtaactccagaggaagcggcaagctcttctcctttgag
atagtggatgagagtggagagatcaagatcacagccttcaacaatgaagtggacaagttt
ttctctctagtggagcaaggcaaggtgtactacatctccaaagctacactgaaggttgcc
aacaaacagtacaccacgctgaagaacgactacgagatcaccctcaacactcactcaagc
attgtgccatgtaatgacagtgagagcatccccacagcgcactgcgactttgtacccatc
gcagagctggaaaaccgagacaaagacgccatcattgatgtgattggagtgtgtaagagt
gcagaggatgtcacccgtatcgtcactaagaccagcagagaagtctccaagagggccctc
cacctaatggacacgagtggcaaagaggtcacagtcacactgtgggcagaggcggcggag
aagtttgacggctccgggcagcctgtggttgccatcaaaggcgctcgcttgtctgatttt
gggggcagatctctctctgctttgttcagctcaacagtcatggtcaacccagacataccg
gaggcctttagactgagggcctggtatgaccgggaaggctacgcagtcaacagccaatcg
ctgacagagaccagggcaacaggcggcggatcacagatgaactggaaaatgctgagcgac
attaagaatgaagccatgggacaaggagagaaggcggattatttcagctgcgtggcgaca
gtgctgtacatacggagggagaattgtctgtatcaggcctgtccatctgcagactgcaac
aaaaaggtcatagaccaacagaacggacagtaccgctgcgagaagtgtaaccgagagttc
cccaacttcaaatacagactcctactttctgccaacttggcggactccggggataaccag
tgggtgacatgcttccaggagacagccgaggtcctgttgggtcacagtgcagaaacgctg
ggacagctcagagacacagatgaagctgcattcgatgaagtcttccagaaagctaacttc
acaactcacatctttaaaaaccgagtcaagctggagacgtacaacgacgagagtcgagtg
aaggtaactgtaatggaaatccaaccggtcgaccacagggaatacagcaggagactcctc
aggaacatccacagatgggcaagctga
DBGET
integrated database retrieval system
