Brachyistius frenatus (kelp perch): 138633655
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Entry
138633655 CDS
T10614
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138633655 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138633655 (rbm22)
Spliceosome [BR:
bfre03041
]
Complex B
Other components
Prp19-related factors
138633655 (rbm22)
Complex C
138633655 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
138633655
NCBI-ProteinID:
XP_069576120
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGISVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAASSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPISSPAV
MNLGLPPPPGINPPPPGYGHPMFHPMGPMAPPLPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRQGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccctgggctccaacacctacaacagacaaaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaatccttacatccgtatgaccaaggagaag
tatgggaaagaatgcaagatttgtgctcgaccctttaccgtgttccgatggtgtccgggg
gcacggatgcgtttcaagaagaccgaagtctgtcagacctgcagcaaaatgaaaaatgtt
tgtcagacatgtctgctggatctggagtatggtttgcccatccaggtccgagacaccgga
atttctgttaaagatgaggttcccaagtccgatgtgaataaagagtactacacacagaac
atggagagagagatagccaattctgatggcacacggccggttggccagctcggcaaagct
gcaagctctagtgatatgttgctcaaactggcccggaccacaccctattacaagaggaac
cggccacatatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tacaggcatgagaagcccacagatcctgatgaccctctggccgaccagaacataaaggat
cgatactacggtatcaacgacccagtagctgacaagctgctgaagcgggcctcaactatg
ccccgactggaccctccggatgacaaatccatcaccaccctgtacatcgggggtttggga
gatactgtcacagatggcgatctcaagagtcacttctaccagtttggtgaaattcgaacc
attaccatcgtccagaggcagcagtgtgcgttcatccagttcgccacgcggcagtcagct
gaaatggcagcggagaagtccttcaataaactcattattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggtatcaaagatggtgtcagtgag
atgggtaccagactggatcccgtacccggactgcctggagctttacctccaccaccagct
ctagatgaagaggctcctgcaaactacttcaacctcgaccccatctcttctcctgcggtc
atgaacctcggtttgcccccacctccaggcatcaacccacctcctccaggttatggccat
ccaatgtttcacccaatgggtcccatggccccacctcttccccctcctatgagcatgaga
cctcccggtcaaatccactacccatcccaggatcctcagcgcatgggtgctcacgccgct
catggctcacgccaaggtgattag
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integrated database retrieval system
