Brachyistius frenatus (kelp perch): 138633934
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Entry
138633934 CDS
T10614
Symbol
vcpip1
Name
(RefSeq) LOW QUALITY PROTEIN: deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfre01002
]
138633934 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138633934 (vcpip1)
Enzymes [BR:
bfre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138633934 (vcpip1)
Peptidases and inhibitors [BR:
bfre01002
]
Cysteine peptidases
Family C64
138633934 (vcpip1)
Ubiquitin system [BR:
bfre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
138633934 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
RA_2
Motif
Other DBs
NCBI-GeneID:
138633934
NCBI-ProteinID:
XP_069576575
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MSLLQSSKKKDKRILSGTCPDPKCQARLFFPAYGSVSIECTECGQRHEQKNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEPDHVSTMGYGKDRSGSLIYLHDTLEEVKKANGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIVLLDSLSGMRSSGDYSATFLPGLVAEE
QCRGKDGKLNKPICIAWSSSGRNHYIPLVGIKNTVLPKLAARLLPKAWGVPQELIRKYIK
LESDGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKYSIHPSLVADVHQYVYRRTGVIGIQP
EEVTEAAKKSVMENRLHRCLICGALSELHVPPEWLVPGGKLYTLAKTTHGQLRPDKNYSF
PLNNVVCSYDPQRDVLVPDYKLSSLNTCNWCHGTSVRHIRGDGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEAKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDLALNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDEYNPVSIDGAHVQRLTDGADAGQPAADTQ
PPTKIILTGQKAKTLHKEELTMSRAERSIQQSISEQAFVSQKRRTDKLKQEQKGPGRAPS
PGGSPENSSSSSAPATPTKSSSPSSSSSSSSSSSKEKKIRVTTSDGRQATLTLQAHTTFS
ELQRSIADQFGVPPAQQCIRHGFPPKELAAPRDGEENEPAALQHGDRVTVEILRGPEDKG
PPAAAVMTRASSSHSALHSAQDAVTAGRMSNRELQDGIDLEMSSLCLLATLMGEDVWSYA
KKLPHLFQQGGVFYNIVKKDMGLMDGKHCTLPHLAGKTFVYNAAEERLELCVDAAGHFPV
GPDVEELVKEALVQLRSEAATRGSREGSPSHGVLRLGSGGVVRKKEQLQSVTAFQGKGHS
LGSAGGSSPPEHRPITRQHSSGVDLSASVSRGPPDLSDIPEDATRELVRMAPGFVTMKDG
HVLDPSLMEQQRKKLQEMVSSIQASMERHLKEQQSAAAAAAGGGASQERTGGTKTTDAVQ
PGSAVDPKPPGEAGAGGXAAAAASRPDGKAEDLEEMESQDAGQSNVIEPMDHS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgcagagctcaaagaaaaaagacaagcgtattttgtctggtacctgccca
gacccgaaatgtcaggcgaggcttttcttccccgcgtacggctccgttagcatcgagtgc
acggagtgcggccaacgccacgagcagaagaacctgttaaatgtcgaagaagtgacggat
ccagatgtcgtgctccacaatctgctcagaaacgccctgctcggcgtcaccggggccccg
aagaaggggaccgagctggtgaaggtgatggggctgtccaattaccactgcaagctcctg
tccccggtcctcaccaggtacggcatggacaaacaaaccggcaaggccaagctgctgcgc
gagatgaaccagggggagatgttcgactgctccctcctgggggaccgagctttcctcatc
gagccggaccacgtctccaccatgggctacggtaaggaccggtcggggagcctcatatac
ctccacgacaccctggaggaggtcaagaaagccaacggcaacagagagtgtctcatcccg
gtccacgtggacggggacgggcactgcctggtccacgccgtgtccagagcgctcgtgggc
cgggagctgttctggcacgcgctgagggagaacctgaagcagaacttcaagcagaacctg
gaccgctacaaggccctctttcaggattttatcgacgccgccgagtgggaggacatcatc
aacgagtgcgaccccctgttcatcccgcccgaaggcgtgccgctcgggctgcgcaacatt
cacatattcggcttggccaacgtcctccaccggcccatcgtcctgctggactccctgagc
gggatgaggagctccggggactactcggccaccttcctgcccgggctggtggccgaggag
cagtgcaggggcaaagacgggaagctcaacaaacccatctgcatcgcgtggagcagctcc
gggaggaaccactacatccctctggtggggatcaagaacacggtgctgcccaagctggcg
gcccgcctgctgccgaaggcctggggcgtcccgcaggagctcatccggaagtacatcaag
ctggagtcggacggcagctgcgtgatcggcggcgaccgcagcctgcaggacaagtacctg
atgaggctggtcaacgccatggaggaggtgttcatggagaagtacagcatccacccgtcg
ctggtggccgacgtgcaccagtacgtgtacaggcggaccggcgtgatcggcatccagccc
gaggaggtgacggaagcggccaagaagtcggtgatggagaaccggctgcaccgctgcctg
atctgcggcgccctctccgagctccacgtgccgccggagtggctggttcccggcgggaag
ctctacaccttggccaagaccacgcacggccaactgaggcccgacaagaactacagcttc
cccctcaacaacgtggtctgctcctacgacccccagagggacgtcctcgtcccggactac
aaactgagctccctcaacacctgcaactggtgtcacggcacgtcggtccgccacatccgc
ggcgacgggtcggtggtctacctggacggggacagaaccaacacccgctcccagggcggc
aagtgcgggtgcggcttcaagcattactgggaggcgaaggagtacgacaacctccccgaa
gccttccccatcaccctggagtggggcggccgggtggtgcgggagacggtgtactggttc
cagtacgagacggacctggcgctgaacagcaacgtgtacgacgtggccatgaagctggtc
accaagcacttcccgggcgagttcggcagcgagatcctggtgcagaaggtggtgaacacc
atcctgcaccacacggccaagaagaacccggacgaatacaacccggtgtccatcgacggc
gcccacgtccagcgcctcaccgacggcgccgacgccggccagccggcggccgacacgcag
ccgcccaccaagatcatcctgacgggccagaaggcgaagacgctccacaaggaggagctg
acgatgagccgggcggagcgcagcatccagcagagcatcagcgagcaggccttcgtctct
cagaagcgacgcaccgacaagctgaagcaggagcagaagggcccgggacgggcgccgtct
cccggcggctctccggaaaactcctcctcctcttcggccccggccacgcccaccaaatcc
tcgtcgccgtcctcctcctcctcctcctcctcctcgtccagcaaggagaagaagatccgc
gtgaccaccagcgacggccggcaggccacgctcaccctgcaggcccacaccaccttctcg
gagctgcagcggagcatcgccgaccagttcggcgtgccgccggcgcagcagtgcatccgc
cacggcttcccgcccaaggagctggcggcgccgagggacggcgaggagaacgagccggcg
gcgctgcagcacggcgaccgcgtcaccgtggagatactgaggggccccgaggacaagggc
cccccggcggccgccgtgatgacgcgggcctccagctcgcactcggcgctgcactcggcg
caggacgccgtgacggccggcaggatgagcaacagggagctccaggacggcatcgacctg
gagatgtcctccctctgtctcctagcaaccttgatgggtgaggacgtttggtcgtacgcg
aagaagctgccgcacttattccagcagggcggcgttttctacaacatcgtcaagaaagac
atgggtctgatggacgggaagcactgcacgctgcctcacctggccggcaagaccttcgtc
tataacgcggcggaggagcgcctggagctctgcgtggacgccgccggccacttccccgtc
ggccccgacgtggaggagctggtgaaggaggcgctggtgcagctgcgctcggaggcggcc
accaggggcagcagagagggcagcccgtcgcacggcgtgctgcggctcggcagcggcggc
gtcgtccgcaagaaggagcagctgcagagcgtcaccgccttccagggcaaaggccactcg
ctgggcagcgccggcggctcctcccctccggagcaccggccgatcacgcgccagcacagc
agcggcgtggacctgagcgccagcgtgtcccggggacccccggacttgtcggacatcccc
gaggacgccaccagggagctggtccgcatggctccgggcttcgtcaccatgaaggacggc
cacgtgctcgacccgagcctgatggagcagcagcggaagaagctgcaggagatggtgtcg
tccatccaggcctccatggagcggcacctgaaggagcagcagagcgccgccgccgccgcc
gccgggggcggggccagccaggagcggactggcgggactaagacgacggacgcggtccag
ccggggtccgcagtcgaccccaaacctcccggggaggcgggcgcgggggggncggcggcg
gcggcggccagcagaccggacgggaaggcggaggacctggaagagatggagagccaggac
gccggacagagcaacgtcatcgaacccatggatcactcctga
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