Brachyistius frenatus (kelp perch): 138634207
Help
Entry
138634207 CDS
T10614
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138634207 (dhx34)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138634207 (dhx34)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138634207 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
138634207
NCBI-ProteinID:
XP_069577048
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MSSDRRRDSRSWDWDSPQCRAQLDEIFFRKHDYIQAGSPEHKEFWAFFDRFQRFKTKRDM
SGSGVGRKEDREEGREGRKTDAGKVDLGLPKEYDARYRINVSVCTGDVEERLGKTEQGSR
QRPSGPGAREVSDCRMALLHFLDFSQRQSFGKLAKLRREQKNLPIFQYQDRIVELVRLHP
VVVVAGDTGCGKSTQVPQYLLSAGFSQIACTQPRRIACISLAKRVSFESLNQYGSKVGYQ
IRFETTRTTATNLLFLTEGLLLRQIQQDRTLAQYQVVIVDEVHERHLHCDFLLGVLRSLL
ADRPDLRLILMSATINIKLFSNYFSGAPVLQVPGRLFPIQIIYQPIPPEEQASRSEKLDP
RPYLRILQGIDQRHPPEERGDLLLFLSGVAEITTIQEACQIYATHTRRWIVLPLHSTLSI
AQQDKVFDISPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFW
ISRASSEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLILQMKSMSLGD
PLSFVFIDPPPTASIQTAVTYLKAQGALDSRGELTSIGSLLAQLPVDVVIGKMLVLGSLF
NLVEPVLTVAAALSVQSPFLRSSQHNPDCATARQPLQSSQGDPFTLLNTFNAWVEVKGER
GGGSRKWCRRRGLEEQRLYEMVNLRRQFKELLRSHGLLKSEDSAPSAGDRRQRRERLTER
RKLHQLKREHEQQEGSKRKVLRLSEGQDGEFSSGSDTEDTGRGRKDKKEGSGQNMDIQEV
KFKLRHNVSELQAGISQDLSSRQQALLKLLLCRGLYPQLALPDEHNSTRKDSDQVFHTKN
KQGVVIHPTSVFASDPEVLHVPEDTREMGPDRKDSSKHQLLAFVTLLETNKPYLSNCVRA
PALQALLLVANSVDTNADCARLVVDGWLELELREPEEALKVLSTAVTLRAEWERLLQVQL
GQKSTAGEEVQGVSRRVMEKLSEGLVRFLLYTEVSYSLRRLAAFQSQNLYIGPQSEVESS
HSEASHLNLLFPGAEVKPDPIKGGLRVTNFFTYNCLADSKNLYSECLRTFWTCPNCGLYM
PLTPLERMHHQASCRPAGEQQQPEEEPEGAKEVSSSATSLTRVYHCDVCNEDLTLTSTEI
LKHKRQHMYSAK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggacaggaggagggacagccggagttgggactgggacagcccgcagtgccga
gcccagcttgatgagatctttttccgcaagcacgactacattcaggccggcagccctgag
cacaaagagttctgggctttctttgaccgcttccaaaggtttaaaacaaagagggacatg
tctggttctggggtcggccgaaaagaggaccgggaagaagggagagaggggaggaagacc
gacgctgggaaggtggatcttgggcttcctaaagagtacgatgctcgctaccggatcaac
gtgtctgtgtgcaccggggacgtggaggaacgcctggggaagacagagcaagggagccgg
cagagaccctcgggacccggcgcccgggaggtgtccgactgccgcatggctctcctgcat
ttcctggacttcagccagagacagagttttggcaagctggccaagcttcgccgggagcag
aagaacctgcctatcttccagtaccaggatcggatagtggagctggtgcgtcttcacccg
gtggttgtggtggcaggagatacaggttgcggaaaatccacacaagtgcctcagtatctt
ctctcagctggcttcagccagatcgcctgcactcagcctcggcgcatcgcctgtatatcc
ctggcaaagagggtcagctttgagagtctcaatcagtacggctcaaaggtggggtatcag
atccgcttcgagaccacgcggaccacagccaccaatctgctgttcctcaccgaggggctg
ctgctccgacagatccagcaggacaggacgctggctcagtaccaggtggtgattgtggat
gaggtccacgagagacacctccactgcgacttccttctgggggtcctgcgctctctgctg
gccgaccgcccggacctgcgtctcatcctcatgtcagccaccatcaacatcaaactcttc
tccaactatttcagcggcgctccggtgctgcaggtaccaggcaggctgtttcctattcag
attatataccagcccattccgcccgaagagcaggcctcacgttcggagaaactggatccc
cgaccgtacctgcgcatcctgcagggcatcgatcagcgtcaccctccggaggagcgcggt
gacctgctcctcttcctcagcggtgtggctgagatcaccaccatccaggaggcctgtcag
atttacgccacacacacacgtcgctggatcgtcctaccgctgcacagcacactttccatt
gcccagcaggataaggtgtttgacatttctcctcccggcgtaagaaagtgcatcatctct
accaatatcgctgagacttcagtaacaatagatggggtgcgctttgttgttgactcagga
aaagtgaaggaaatgagttttgatccgaaggccaagatgcaacgtcttcaagagttctgg
atcagccgagccagctctgagcagaggaagggtcgagccggtcgtacgggtccaggagtg
tgttaccgcctctacgctgagtctgactacgacgccttcgctccttatcctgtgcccgaa
atccacagagtcgctctggactccctcatcctccagatgaagagcatgtctctaggagat
ccactgtcttttgtttttattgatccacctccgactgctagtatccagactgcagttact
tatctgaaagcgcagggggcgcttgacagtcgtggtgaactgacttctattggtagtttg
ttggcacagctgcctgtcgatgtggtcatagggaaaatgctggtgttgggttctttgttt
aacctggtggagcccgtgttgacagtggcagcagccctgagcgttcagtcacctttcctg
cgcagctcacaacacaaccctgactgtgctaccgcccgtcagcccctgcagagcagccag
ggagacccctttaccctgctcaacaccttcaatgcctgggtggaggtgaagggagagaga
ggtggtggctcaaggaagtggtgcaggaggagaggccttgaggagcagcgactatatgag
atggtcaacctacgcagacagttcaaggagttgttgaggagccatggtctgctgaaatca
gaggacagcgctccctctgctggtgaccgtcggcagcgcagggagaggctgacggagagg
aggaagctgcatcagctgaagagagaacacgagcagcaggaggggagcaaacgtaaagtc
ctgaggctgagcgagggccaggacggagagttctcctccggatcagacacagaggacaca
ggcagaggcaggaaggacaagaaggagggatcaggacagaacatggacatacaggaggtg
aagttcaagttgcgtcacaatgtgtcagagctgcaggccggcatcagtcaggacttgtcc
tcccgccagcaggctttgctgaagctgcttctttgcagaggcctctatcctcagctggcg
ctgccggatgaacacaactccacccgcaaggactccgaccaggtgtttcacaccaagaat
aagcagggagttgtgatccacccaaccagtgtgttcgccagcgacccagaggtgctacac
gtgcccgaagacaccagagaaatggggcccgataggaaggacagcagcaaacaccagctg
ctggccttcgtcactctgttggagaccaacaagccttatttgtccaactgcgtgcgggca
cctgctctgcaagctctgctgctggttgcgaactccgtggacactaacgccgactgtgcg
aggctagtggtggacggctggctggagctggagctgagggagccggaggaggcgctgaag
gttctgtccacagctgtcaccctccgggccgagtgggagcgcctgctgcaagtccagctg
ggacagaagtcgacagcgggagaagaagtgcagggggtgtcccgcagagtcatggagaag
ctgagcgaaggcctggtccgcttcctgctctacactgaggtcagctacagcctgcgccga
ctcgcagctttccagagccagaacctgtacattggtcctcagtctgaggttgagtcttct
cactctgaagcttcacatctgaacctgctgtttccgggagccgaggtgaagccggacccc
attaaaggaggcctgcgtgtcaccaacttcttcacctacaactgtctggctgattcaaag
aatctctacagcgagtgtttacgtacgttctggacctgtcctaactgtggcctctacatg
cctctgactccactggagcgcatgcaccaccaagcttcctgcaggccagccggggagcag
cagcagccagaggaagagccggagggtgcgaaggaagtctcctcgtcagcgactagtctt
accagagtttatcactgtgacgtctgtaatgaagacctgacccttacctccactgaaatc
ctcaaacataaaaggcagcacatgtattctgccaagtaa
DBGET
integrated database retrieval system
