Brachyistius frenatus (kelp perch): 138634209
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Entry
138634209 CDS
T10614
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138634209 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
ADIP
Motif
Other DBs
NCBI-GeneID:
138634209
NCBI-ProteinID:
XP_069577050
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAAFGAERWLNDLPNHAIFKTIRRKLGLEPSAHERETAKNLTFCLGGDFFLWDDGDRVFY
TTNLRHLNSEESDGDGNGGDGNGGKYQTMLCINPPLFEVCQVLVSPTQHHVALVGQRGVS
VLELPQRWGKRSEFEGGRGDVNCRTIPVAERFFTSSPSVTLRQADWYPSETDEPHLVLLT
SDNTIRFYGLKSPQTPARVLPLSQSEDGGGGGGAPARSYAASLGEIAVAFDFGPISSPPR
QLVTQCAKGQPVYPLYVLYENGETYVSYTSQATGVSLSRPVGPLPMYPAAEDNYGYDACA
ILCLPCAPSILVIATETGTLYHCVVLESEEEEETRAVEKWIRGTDAVPALYVFECVELEL
TLKVASAEDEEPQEFDFTCPIRLHRDPLCQHRYHCTHEAGVHSVGLIWVNKLQKFLQSDE
EDKDGLQELAAEKRCIVEHILCTRPLLTSRSAPVRGFLIVSDLSLGATMICITSTYECLM
LPLLSSIRPPSPPLLCSHPGPGSSSSPLRGLADDSFEQHIRNILARSSTNPLVLKAGDKD
TSSPPPPECLQLLSRATQVFREEYILKQDMAREEMQRRVKLLTGQKNKQLEEMTLCREES
RSLREAAERLADKYEDAKYRQETIMNKVKKVLCSLQSQLPILSNSEKDMKKELQSVSDQL
KYLDNCIRQVNMKLDYQKTQVDKDMPAARTTVSLNAQQKKVVQDVLREQGQQIGDMMKQI
KDIKNHFSF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcggcgcggagcgctggctcaatgatttgccaaaccatgccattttcaaa
acgatacgacgcaagctgggtttggaaccgagcgcacatgaacgagaaacggccaagaac
ctgacgttttgtttgggcggtgactttttcctgtgggacgacggagaccgcgtgttttac
acgacgaacttgcgccacctgaattcggaagagagcgacggcgacggcaacggcggcgac
ggcaacggcgggaagtaccagaccatgctgtgcatcaacccgcctctcttcgaggtgtgc
caggtgttggtcagcccgactcagcaccacgtcgcgctcgtcgggcagcggggcgtctcg
gtgctggagctcccgcagcggtggggcaagaggtccgagttcgagggcggacgcggcgac
gtcaactgcaggaccatcccggtggcggagcgcttcttcaccagctcgccgtcggtgacc
ctgcgccaggcggactggtacccgagcgagaccgacgagccccacctggtgctgctcacg
tccgacaacaccatcaggttttacggcttgaagtcgccccagacgccggccagagtcctg
ccgctgtctcagtcggaggacggcggcggcggcggcggcgcgccggcccgctcctacgcc
gcgtctctcggagagatcgcggtggcgtttgacttcgggccgatttcgtcccctcccagg
cagctggtaacacagtgcgccaaaggacagccggtctatcctctctacgtcctctacgaa
aacggggagacctacgtgagctacacgagccaggcgaccggcgtgagtctcagcagaccc
gtgggaccgctccccatgtaccctgcggcggaggataactatggctacgacgcttgtgcc
atcctgtgcctgccctgcgcgcccagcatcctggtcatcgccaccgaaacgggcacgctg
taccactgcgtggtgctggagtctgaggaagaggaggagacccgggcggtggagaagtgg
atccgaggcaccgacgcggtgccggctctctacgtgtttgagtgcgtggagctcgagctc
acgctcaaagtggcctcggcggaggacgaggagccccaggagtttgacttcacctgcccc
atcagactgcacagagaccccctgtgtcagcacaggtatcactgcacccacgaagcgggc
gtgcacagcgtggggctgatctgggtcaacaagctgcagaagttcctccagtccgacgag
gaggacaaggacggtctccaggagctggccgccgagaagcgctgcatcgtggagcacatc
ctttgcaccaggccgctcctcaccagtcggtcggctccggttcgtggctttttgatcgtg
tcggacctctccttgggcgccaccatgatctgcatcaccagcacctacgagtgcctcatg
ctgcccctgctgagctccatccggcctccgtcccctccgctgctctgctcccaccccggc
cccggctcctccagctcgcctctgcgcgggcttgccgacgactccttcgagcagcacatt
cgcaacatcctggcccgcagctccaccaaccctctcgtgttgaaggcgggcgacaaggac
acgtcgtcgccgccgcctccggagtgtctgcagctcctcagcagagccacgcaggtcttc
cgcgaggagtacatcctcaagcaggacatggcccgcgaagagatgcagaggagggtgaag
ctgctgacgggccagaagaacaagcagctggaagagatgactctgtgccgggaggagagc
aggagcctgagggaggccgcggagagattggccgacaagtacgaagacgcaaagtatcgt
caggaaaccatcatgaacaaggtgaagaaagtgttgtgcagcctgcaaagccaactaccc
atactgtccaacagtgaaaaggacatgaagaaggagctgcagagcgtcagtgatcaactg
aaatacctggacaactgcatccggcaggtcaacatgaagctggactaccagaagacacaa
gtggacaaggacatgcccgcagccaggaccacggtgtcactcaacgcccagcagaagaag
gtggtgcaggacgtcctccgagaacagggacagcaaattggtgacatgatgaagcagatc
aaagacatcaaaaaccattttagtttctaa
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