Brachyistius frenatus (kelp perch): 138634328
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Entry
138634328 CDS
T10614
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04140
Autophagy - animal
bfre04148
Efferocytosis
bfre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138634328 (vps16)
04148 Efferocytosis
138634328 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138634328 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138634328 (vps16)
Membrane trafficking [BR:
bfre04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138634328 (vps16)
Hops complex
138634328 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
138634328
NCBI-ProteinID:
XP_069577269
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAFITASWNPLGEAFYRKCDLYEMSWTIRDGLRDSLVSAAPYGGPVALLREPHRRSPSSR
PQLEIYSASGGSIASFPWKSGPVVQLGWTVSDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGIAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSNGPELYILDNTSCTAVCPPGLSPQAGSIVQMSVSFSYKYLALFTDTGHL
WTGSSHLQEKLNEVDTKKTTTPKQMVWCRRPKSQQPSVVLMWDRLLMVAGVCNDTIQFPV
EDPCVLVGELDGVRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLMRAASFGKCFLTDFCPDPFVSTCR
ELRVLNAVRESSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWAACKVQQKDLSDEAIAQVVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLESRLSLLQSAVDEYNKAKNE
FSAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKCNNKYEAKKYVSKVTPEQR
VKAHLAVGDLEGAADAAIERKNESEMGAVLARCSGSDRLLIDRLNRATTAKK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcaccgccagctggaacccgctgggagaagctttctatcgtaagtgtgac
ctgtatgagatgagttggaccatcagagacggactcagagacagtttggtgtctgcagct
ccatacggaggaccagtagctctcctcagagaacctcacagacgttctcccagttctcgt
cctcagttggagatttattcggcgtctggcggcagcatcgccagtttcccttggaagagt
ggtcctgtggtgcagctcggttggacagtgagtgatgaattgttgtgcgtccaggaggac
ggatcggttctgatctacgatctgtttggatccttcaagagacacttcagtatgggacag
gaagtggtccagagtcaggtgttggaagccaaggtgttccactctccttatggaacaggt
attgccatagtaacaggctcctcccgctttaccttagcaaccaacattgatgacctgaag
ctccgcaggttacctgaagtcccaggtcttcaggggaagccatcctgctgggtcgtcctg
actcaggacagacagactaaagtcctgctgtccaacggacctgaactctacatcctggac
aacacgtcctgcactgctgtgtgtcctccaggtctcagtcctcaggccggcagcatcgtc
caaatgtctgtgtcattcagctataaatacctagctctcttcactgacactggacacctg
tggacaggctcctcccacctgcaggagaaactgaatgaagtcgacaccaagaagacaaca
acacccaaacagatggtttggtgtcgcagaccaaagagtcagcaaccgtctgttgtgttg
atgtgggacaggctgctcatggtggccggagtgtgtaacgacaccatccagttccctgtg
gaggatccctgtgttctggtgggagaactggacggagtccggatcatcagctccaccaat
caggagctgctgcaggaggttcctctggtctgtcaggacatcttcaagatcgcctccatg
gctcctggagctctgctgctggaggctcaccgggagtacgagaagtcaagtcagaaggct
gatgagtacctgagggagatcaaggagcaaagcatgctgggagaagcagtccggcagtgc
gtggaggcagcaggtcacgagtacgacaccaacacccagaagtccctgatgagggcggcg
tccttcgggaagtgtttcctgacagacttctgtccggatccgttcgtgtccacctgccgg
gagctccgagttctgaacgccgtcagagagagcagcgtggggctgccgctcacacacact
caattcaaacagatgactctgcaggtgctgattgacaggctggtgtatcgacagttttat
ccgttagccatcgaaatctgtcgttacctgaagattcctgattatcagggagtcagccga
gtcctcaagcactgggccgcatgcaaggtgcagcagaaggacctatcagatgaggccata
gctcaagtggtgtgtgtgaaggtgggagactcacctggtgtctcgtattcacacatcgca
gctaaagcgtacgaatgtggacgcactgaactcgccatcaagctgctggattttgaggct
cggtctggggagcaggttcctctgctgctgaagatgaagaggagtcagctggctctcagt
aaagctgtggagagcggagacactgacctggtgtacacggtggtgagttacctgaagaac
gagatgaacagaggagatttcttcatgactttgaggaaccaaccggtcgccctcagtctc
tacagacagttctgtaagctgcaggaacaggaaactctgaaggatctttacaaccaggat
gacgatcatcaggagctggctaactactacgtcactgccagttacagagaaaagaggttg
gagagccgtctgtctctcctgcagagtgctgtagacgaatacaacaaggcaaagaacgag
ttttctgcgaaggccaccgaggacgagatgcgtctcctccgttttcagcgtaaactggac
gatgagaaaggggcggggcttctgggactgtctctacaggccaccatggaagctctgttg
gctttaggacttcacaaacaggcggagcaactttacagagacttcagagtacctgacaaa
aggtattggtggttgaagctcaagtctctggcggagaaggaagagtgggaggagttagag
aagttctcaaagagcaagaagtctcccattggctatctggcatttgttgaagtttgcatg
aagtgtaacaacaagtacgaagccaagaagtacgtttccaaggtgacacctgagcagagg
gtcaaagctcacctggccgtcggtgacctggagggggcggcggacgctgccatcgagcga
aagaacgaatcagagatgggggcggtccttgcgagatgctctggctctgaccgtctgctg
attgacaggttgaaccgagccactactgccaaaaagtga
DBGET
integrated database retrieval system
