KEGG   Brachyistius frenatus (kelp perch): 138634542
Entry
138634542         CDS       T10614                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
bfre  Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bfre03009]
    138634542 (nle1)
Ribosome biogenesis [BR:bfre03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    138634542 (nle1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin DSE1_N WDR90_beta-prop_4th ASA1 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NLE Beta-prop_IFT140_1st CFAP251_N Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_DCAF12 PAC11 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N TRM82_WD Beta-prop_SPT8 eIF2A Tricorn_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Nup120_160 Ge1_WD40 RMC1_N PD40 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Cytochrom_D1 PALB2_WD40
Other DBs
NCBI-GeneID: 138634542
NCBI-ProteinID: XP_069577640
LinkDB
Position
Unknown
AA seq 479 aa
MTMSEDVERLLIQFQDENGELLGSPFDVPLDITQDKLQLVCNALLQKEEPVPLAFFVRGE
AEVVSSLGSCVKALEVETEQILPVVYQPQAVFKVRAVARCTSTLQGHTEAVISTAFSPTG
KYLASGSGDTTVRFWDLTTETPHHTARGHTHWVLSIAWSPDGKKLASGCKNSQIFLWDPV
TGAQMGKTLTGHTKWITWLCWEPLHLNPECRFLASCSKDGSVRIWDTVLGRCEKILTGHT
QSVTCVKWGGDGLLYTSSQDRTVKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAF
EPATATINPQDLTGSLDELKERALQRYNKVRGSAPERLVSGSDDFTLFMWNPAEDKKPLA
RMTGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRNGKYLMSLRGHVASVYQVAWSADS
RLLVSGSSDSTLKVWDIKTGKLNMDLPGHADEVYTVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgacgatgagtgaggacgtggagcggctgctgatccagtttcaggacgagaatggggag
ctcctgggctccccctttgatgtgcctctagatataacccaggacaaactacagctcgtc
tgcaatgcgctgctacagaaagaggagccagtgccgctggcgttttttgtgcgcggagag
gccgaggtggtgtctagtttgggatcatgtgttaaggctcttgaagtcgagactgagcag
attctgccggtggtgtaccagcctcaggctgtcttcaaggtccgggctgtggcccgctgt
accagcacactccaaggacacacagaggccgtcatctcaactgccttcagccccactggc
aaatatctggccagcggttcaggtgataccacagtgcgtttttgggacctgacaactgag
acacctcaccacaccgccagaggacacacacattgggtgcttagcatcgcctggtcacct
gatggcaagaagctggcttcagggtgcaagaacagtcagatctttctgtgggatccagtg
acgggtgcacagatggggaagactttgacaggacacaccaagtggatcacttggctctgc
tgggaacctctccatcttaacccagagtgtcggttcttagccagttgctctaaggatggc
tcggtacggatctgggacactgtgttgggacgctgcgagaagatcctgactggacacact
cagtcagtcacctgtgtgaagtggggaggagatggactgctgtacacttcttcccaggac
aggacagtcaaagtgtggagagcgaaagatggtgtccagtgcaggactctgcagggccac
gcccactgggtgaacactcttgctctcagcacagactatgtcttgcgtactggagcattt
gaacctgccactgccaccattaaccctcaggatctcaccggatcactggatgagctgaag
gagagagccttgcagagatataataaagttaggggttcagctccagagcgcttggtgtca
ggctcagatgatttcaccttgttcatgtggaatcctgcagaggacaagaagccgttggcc
aggatgaccggccacagcgctctggtcaacgaagtgctcttctccccagacaccaggctg
cttgcctccgcctccttcgataagtccattaaaatctgggatggacgcaatggaaagtac
ttaatgtccctgcggggccatgtggcatctgtgtatcaagtggcgtggtcggcagacagc
aggctgctggtcagcggcagcagcgacagcacacttaaagtttgggacatcaagactggg
aagctaaacatggaccttcctggccatgctgacgaggtttatacagtggactggagtcct
gatgggcagcgagtggccagtggcgggaaagacaaatgtctccgaatatggaggagatag

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