KEGG   Brachyistius frenatus (kelp perch): 138634832
Entry
138634832         CDS       T10614                                 
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
bfre  Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfre03019]
    138634832 (gemin5)
   03041 Spliceosome [BR:bfre03041]
    138634832 (gemin5)
Messenger RNA biogenesis [BR:bfre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     138634832 (gemin5)
   mRNA cycle factors
    P-body specific factors
     138634832 (gemin5)
Spliceosome [BR:bfre03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    138634832 (gemin5)
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_WDR3_1st WD40_CDC20-Fz GEMI5_RBS Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_RIG_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_HPS5 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_ACSF4 TPR_IF140-IFT172
Other DBs
NCBI-GeneID: 138634832
NCBI-ProteinID: XP_069578106
LinkDB
Position
Unknown
AA seq 1472 aa
MHERSLPASPNWYCSRCSDVSSSGLLGVGAKYIIYLIDVSASSCRVVGELVGHKDLVSGF
SFCQHAGQSHICVSSSGDGSIRFWDSESKILIREHAAHQSPVSAVHWSPVDKNLVVSGDE
KGVVVCHWYHTGDTASFFPEPRTIFCLSCSPHIWNCVAVGYKDGMIVLIDVSRKGEVMHR
LRGHDDEIHSLAWAPLANEDALHTRPEDSEATNGVSAGEEKGCYLASGSKDQTVRIWSTA
KGKGVMTLKLPYVKRRGSAVDPGVKERLWLNVHWPKGRATQLVSSCFSGELVMWDLSRAG
KQRWTLFGTSSDSQNHSRIVFNMSSVQLPDGKELLVSTSMDREMKCWDLASLECCWTLPT
LGGFVYALTFSPVGTGCLALGVGDSMIRVWNTLTTQNQYDTRTFWQGIKSKVTALAWHPT
KEGSLSFGTDDGKVGIYEVFSNKPPHISSSYHRKTVYTLAWGPPVPPMSFGAAGGKPTYS
LYSCAGEGVILQHDPSKLSGEASDIDKLIKDTNNIKHKLSPHTDLSWKPDGKVVAIGNED
GCIDVFQAPSLKLLCSIQQHHKIINTLRWHHDHGSPPELHCLLASGSCNAVVYVHDLRSV
IEAPPDSPAVLTEPYRRLCGHTAKITGMAWSPHHSARLVTASYDGTAQVWDVLEEAAVSN
YRGHAGYLLCVDWSPVDPDVIWTGGKDFTVQEWNISKQEFTKPPKGKKMVDLREKKKTNP
KQKKGNKKATGGGGSASPEANGEPATGGAKAATRQELSGEDEREGVVGATTSGPATSGPA
TPPPATFEMQRKSSAAVKSKEKPDSTVLKKKKPRSMLPLSTSMDHRPKEELLRDCITLAS
VRHDDAPPAGCVPGRGDHIHLGLFADRQALYHMFEAEEEGHVEAGHYDSVVYLRLWSGDL
QGALQLATERGELNDHLLSVAPMAGFEAWSRAAEAFVKQLCLQEQYLKAASHLLSINKVY
EAVDLLRSHKLYREAIALVKARLPADEPALKELYTCWAAMLEKDGHFSAAAKCHLAAGAS
FDAAKVIARKNDVPSLRAAAGLARISGEAALAQSLALRCAKDLAAAQDWVGADEVLDSQD
RLLVHRLHLCVAELLAAMLQDVIPPAPCVSGHPWAPPGRRRILDHARDVWEERFGVSRES
AGHRGVRALLQELKSAESPTPSANIPLRQVLLYSSLHLTRAVLSWLLDDDGQLTKELWQA
AAWPRDAGHFWVSAELCRLLFPDGDVSVCSTKHPKTLHPAEEEAKAAASSLQAFVHYHRL
YERWWRSSAGGQPTQNGPSPPAAEDEAKDRAPNGGPSGSGGSVCPVAGRLHELDFDASLL
LSEAHAAYQLTHRSVREIQERLATMVLQHSRVQGGQPEPGEKRDDGPSATPAAGETSDKR
DSADAGKSTEDQETLMSLSAKMTTYQKELADLPNTIKMYPHPDVVECSLVLLHLGKSSAS
PSGSLQQEAKDLLHKYGTSSPSVLKASRRLLS
NT seq 4419 nt   +upstreamnt  +downstreamnt
atgcacgaaaggtcgcttcccgcgtctcccaactggtactgctcgcgctgcagtgacgtc
agtagcagcggtttactgggagtcggagccaaatacatcatctacttgattgacgtgtcc
gcgtcctcctgcagggtcgtaggcgagctggtgggccataaggacctggtgtcgggcttt
tccttctgtcagcacgcagggcagagtcacatctgcgtcagctcctccggtgacggcagc
attcgcttctgggactcggaaagcaaaatcctaatacgggagcatgcagctcatcagagc
cccgtctcggcggtgcactggtcccccgtggacaaaaacctggtggtgtcgggcgatgag
aaaggcgtggtggtctgtcactggtaccacacgggagacaccgccagcttcttccctgag
cccaggaccatcttctgcctcagctgctcgccgcacatctggaactgtgtggctgtcggc
tacaaagacgggatgatcgtgctgatcgacgtgagcaggaaaggcgaggtgatgcaccgt
ctccgtggacacgacgacgagatccactcgctggcgtgggcgccgctggccaatgaggac
gccctccacaccagacccgaggacagcgaagcaactaacggagtgtcggctggagaggag
aagggctgctatctcgcgtctgggagcaaagaccagacggtgaggatctggagcacagcg
aagggaaaaggtgtgatgactctgaagctgccctacgtcaagagaagaggctccgccgtc
gaccccggagtcaaagagagactctggctcaacgtgcactggccgaagggacgagcgacg
cagctcgtgtccagctgcttcagcggtgagttggtgatgtgggacctgagccgggccggg
aagcagaggtggactctgttcggcacctcttcagacagtcagaaccacagtcggatcgtc
ttcaacatgagttccgttcagctgccggacggcaaagagctgctcgtcagcacctccatg
gaccgagagatgaagtgctgggacctggcctctctggagtgctgctggactctgcccacc
ctcggcggcttcgtctacgccctgaccttctcccccgtgggcaccgggtgtctggcgctg
ggcgtcggcgacagcatgatccgggtgtggaacacgctgaccactcagaaccagtacgac
accaggaccttctggcagggcatcaagtccaaggtcacagcgctggcctggcacccgaca
aaagaaggatccttgtctttcggaacagatgatgggaaagttggtatctacgaagtcttt
tcaaacaagcctcctcacatatcgagctcctatcaccggaaaacagtgtacacattggcc
tggggacccccagttcccccgatgtcattcggtgcagcaggagggaagccgacctacagc
ctgtacagctgcgccggcgaaggcgtcatcctgcagcacgatccatcgaagctgagcgga
gaggcgtcggacatcgacaagctcatcaaagacaccaacaacatcaagcacaagctgtct
cctcacaccgacctcagctggaagccagatgggaaagtggttgccatcggcaacgaggac
gggtgtatcgacgtgtttcaggcccccagtctgaagctgctgtgcagcatccagcagcac
cacaagatcatcaacacgctgcggtggcaccacgaccacggctccccccccgagctgcac
tgtctgctggcctcgggctcctgcaacgccgtcgtctacgtgcacgacctccgctccgtc
atagaggcgcccccggacagccccgccgtgctgacggagccgtaccgcaggttgtgcggt
cacacggctaaaatcaccggcatggcctggagtccacaccacagcgcccggctggtcacc
gcctcgtacgacggcacggcccaggtgtgggacgtgctggaggaggcggccgtctcgaac
taccgaggccacgccggttacctgctgtgcgtggactggtcgcccgtcgaccccgacgtg
atctggaccggcgggaaggacttcaccgtgcaggagtggaacatctccaaacaggagttc
acgaagccccccaaagggaagaagatggtggacctgagggagaagaagaagaccaacccc
aagcagaagaagggcaacaagaaggcgacgggaggcggagggtccgcgtcgccggaggcg
aacggagagccggctacggggggcgcgaaagcggcgacgcgacaggagctgtccggggaa
gacgagagggagggagtcgtcggcgcgacgacgagcggcccggcgacgagcggcccggcg
acgccgccgccagccacttttgagatgcaaagaaaatcctccgctgctgtaaagagtaaa
gaaaagccagactccaccgtgctgaagaagaagaagcctcgttccatgctgcccctcagc
acctccatggaccaccggcccaaagaggagctgctgcgggactgcatcactctggcgtcc
gtcagacacgacgacgcgccccctgcaggctgcgtcccgggccgaggagaccacatccat
ctgggcctgttcgctgacagacaggctctgtaccacatgtttgaggcagaagaggagggc
cacgtggaggcgggccactacgactcggtcgtgtacctgcggctgtggagcggagacctg
cagggggcgctgcagctcgccacggagcgaggggagctgaacgaccacctgctctccgtc
gctcccatggccgggttcgaggcgtggagccgggcggcggaggccttcgtcaagcagctc
tgtctgcaggagcagtacctgaaggcagcgtcccacctgctgtcaatcaacaaagtgtac
gaggccgtcgacctgctgcgctctcacaagctctacagggaggccatagctctggtcaaa
gccaggctgccagcggacgaacccgcgctgaaggagctgtacacctgttgggccgccatg
ctggagaaagacggacatttctccgcagctgctaaatgtcacctcgctgccggcgccagc
ttcgacgcggccaaagtgatcgccaggaagaacgacgtgccgtcgctgagggcggcggcc
ggcctcgccaggatctcgggggaggcggctctggctcagtcgctggcgctgcgctgcgct
aaagacctggcggccgctcaggactgggtcggagcggacgaagtcctcgactcgcaggac
cgcctgctggtccacaggctgcacctctgcgtcgccgagctgctggccgcgatgctgcag
gacgtcatccccccggctccctgcgtctccggtcacccgtgggcgccgccggggagacgt
cgcatcctggaccacgcgagagacgtttgggaggagcggttcggcgtttcccgcgagtcg
gcgggacaccgcggcgtccgggcgctcctgcaggagctgaagtccgccgagagcccgacg
cccagcgccaacattcccctcagacaggtcctgctgtactcttccctccacctgacccgc
gccgtgctcagctggttgctggacgatgacggacagctgacgaaggagctgtggcaggcg
gcggcctggccgagagacgccggacacttctgggtttctgcagaactctgcaggctgctg
ttccctgacggtgacgtcagtgtctgttccacgaaacaccccaaaaccctccaccccgcc
gaagaagaagccaaagccgccgccagcagtctgcaggcgttcgtccattaccaccgcctg
tacgaacgctggtggaggagctcggcgggcggccagccgacccagaacggaccgtccccc
ccggcggccgaggacgaggcgaaggaccgggcgccgaacggaggaccgtcggggtcggga
gggagcgtctgcccggtggccggcaggctccacgagctggacttcgacgcgtcgctcctg
ctgtccgaggctcacgctgcctatcagctcacccacaggtccgtgagggagatccaggag
cggctggccaccatggtgctgcagcacagccgagtccagggagggcagcccgagcctggg
gagaaacgggacgacggcccctcggccactcccgccgccggggagacgtcggacaaacga
gactcggccgatgccgggaaaagcactgaggaccaggagactctgatgtctttgtccgcc
aagatgaccacgtatcagaaagaactggctgacctgcccaacaccatcaagatgtatcct
cacccggatgttgttgaatgtagcctggtcctcctgcacctcggcaagtcctcggcgtct
ccctccggttccctccaacaagaggccaaagacctgctccacaaatacggaaccagcagc
ccctccgtcctgaaagcctcccggcgactcctctcctga

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