Brachyistius frenatus (kelp perch): 138634832
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Entry
138634832 CDS
T10614
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138634832 (gemin5)
03041 Spliceosome [BR:
bfre03041
]
138634832 (gemin5)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138634832 (gemin5)
mRNA cycle factors
P-body specific factors
138634832 (gemin5)
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138634832 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_GEMI5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
GEMI5_RBS
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_ACSF4
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
138634832
NCBI-ProteinID:
XP_069578106
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MHERSLPASPNWYCSRCSDVSSSGLLGVGAKYIIYLIDVSASSCRVVGELVGHKDLVSGF
SFCQHAGQSHICVSSSGDGSIRFWDSESKILIREHAAHQSPVSAVHWSPVDKNLVVSGDE
KGVVVCHWYHTGDTASFFPEPRTIFCLSCSPHIWNCVAVGYKDGMIVLIDVSRKGEVMHR
LRGHDDEIHSLAWAPLANEDALHTRPEDSEATNGVSAGEEKGCYLASGSKDQTVRIWSTA
KGKGVMTLKLPYVKRRGSAVDPGVKERLWLNVHWPKGRATQLVSSCFSGELVMWDLSRAG
KQRWTLFGTSSDSQNHSRIVFNMSSVQLPDGKELLVSTSMDREMKCWDLASLECCWTLPT
LGGFVYALTFSPVGTGCLALGVGDSMIRVWNTLTTQNQYDTRTFWQGIKSKVTALAWHPT
KEGSLSFGTDDGKVGIYEVFSNKPPHISSSYHRKTVYTLAWGPPVPPMSFGAAGGKPTYS
LYSCAGEGVILQHDPSKLSGEASDIDKLIKDTNNIKHKLSPHTDLSWKPDGKVVAIGNED
GCIDVFQAPSLKLLCSIQQHHKIINTLRWHHDHGSPPELHCLLASGSCNAVVYVHDLRSV
IEAPPDSPAVLTEPYRRLCGHTAKITGMAWSPHHSARLVTASYDGTAQVWDVLEEAAVSN
YRGHAGYLLCVDWSPVDPDVIWTGGKDFTVQEWNISKQEFTKPPKGKKMVDLREKKKTNP
KQKKGNKKATGGGGSASPEANGEPATGGAKAATRQELSGEDEREGVVGATTSGPATSGPA
TPPPATFEMQRKSSAAVKSKEKPDSTVLKKKKPRSMLPLSTSMDHRPKEELLRDCITLAS
VRHDDAPPAGCVPGRGDHIHLGLFADRQALYHMFEAEEEGHVEAGHYDSVVYLRLWSGDL
QGALQLATERGELNDHLLSVAPMAGFEAWSRAAEAFVKQLCLQEQYLKAASHLLSINKVY
EAVDLLRSHKLYREAIALVKARLPADEPALKELYTCWAAMLEKDGHFSAAAKCHLAAGAS
FDAAKVIARKNDVPSLRAAAGLARISGEAALAQSLALRCAKDLAAAQDWVGADEVLDSQD
RLLVHRLHLCVAELLAAMLQDVIPPAPCVSGHPWAPPGRRRILDHARDVWEERFGVSRES
AGHRGVRALLQELKSAESPTPSANIPLRQVLLYSSLHLTRAVLSWLLDDDGQLTKELWQA
AAWPRDAGHFWVSAELCRLLFPDGDVSVCSTKHPKTLHPAEEEAKAAASSLQAFVHYHRL
YERWWRSSAGGQPTQNGPSPPAAEDEAKDRAPNGGPSGSGGSVCPVAGRLHELDFDASLL
LSEAHAAYQLTHRSVREIQERLATMVLQHSRVQGGQPEPGEKRDDGPSATPAAGETSDKR
DSADAGKSTEDQETLMSLSAKMTTYQKELADLPNTIKMYPHPDVVECSLVLLHLGKSSAS
PSGSLQQEAKDLLHKYGTSSPSVLKASRRLLS
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaaggtcgcttcccgcgtctcccaactggtactgctcgcgctgcagtgacgtc
agtagcagcggtttactgggagtcggagccaaatacatcatctacttgattgacgtgtcc
gcgtcctcctgcagggtcgtaggcgagctggtgggccataaggacctggtgtcgggcttt
tccttctgtcagcacgcagggcagagtcacatctgcgtcagctcctccggtgacggcagc
attcgcttctgggactcggaaagcaaaatcctaatacgggagcatgcagctcatcagagc
cccgtctcggcggtgcactggtcccccgtggacaaaaacctggtggtgtcgggcgatgag
aaaggcgtggtggtctgtcactggtaccacacgggagacaccgccagcttcttccctgag
cccaggaccatcttctgcctcagctgctcgccgcacatctggaactgtgtggctgtcggc
tacaaagacgggatgatcgtgctgatcgacgtgagcaggaaaggcgaggtgatgcaccgt
ctccgtggacacgacgacgagatccactcgctggcgtgggcgccgctggccaatgaggac
gccctccacaccagacccgaggacagcgaagcaactaacggagtgtcggctggagaggag
aagggctgctatctcgcgtctgggagcaaagaccagacggtgaggatctggagcacagcg
aagggaaaaggtgtgatgactctgaagctgccctacgtcaagagaagaggctccgccgtc
gaccccggagtcaaagagagactctggctcaacgtgcactggccgaagggacgagcgacg
cagctcgtgtccagctgcttcagcggtgagttggtgatgtgggacctgagccgggccggg
aagcagaggtggactctgttcggcacctcttcagacagtcagaaccacagtcggatcgtc
ttcaacatgagttccgttcagctgccggacggcaaagagctgctcgtcagcacctccatg
gaccgagagatgaagtgctgggacctggcctctctggagtgctgctggactctgcccacc
ctcggcggcttcgtctacgccctgaccttctcccccgtgggcaccgggtgtctggcgctg
ggcgtcggcgacagcatgatccgggtgtggaacacgctgaccactcagaaccagtacgac
accaggaccttctggcagggcatcaagtccaaggtcacagcgctggcctggcacccgaca
aaagaaggatccttgtctttcggaacagatgatgggaaagttggtatctacgaagtcttt
tcaaacaagcctcctcacatatcgagctcctatcaccggaaaacagtgtacacattggcc
tggggacccccagttcccccgatgtcattcggtgcagcaggagggaagccgacctacagc
ctgtacagctgcgccggcgaaggcgtcatcctgcagcacgatccatcgaagctgagcgga
gaggcgtcggacatcgacaagctcatcaaagacaccaacaacatcaagcacaagctgtct
cctcacaccgacctcagctggaagccagatgggaaagtggttgccatcggcaacgaggac
gggtgtatcgacgtgtttcaggcccccagtctgaagctgctgtgcagcatccagcagcac
cacaagatcatcaacacgctgcggtggcaccacgaccacggctccccccccgagctgcac
tgtctgctggcctcgggctcctgcaacgccgtcgtctacgtgcacgacctccgctccgtc
atagaggcgcccccggacagccccgccgtgctgacggagccgtaccgcaggttgtgcggt
cacacggctaaaatcaccggcatggcctggagtccacaccacagcgcccggctggtcacc
gcctcgtacgacggcacggcccaggtgtgggacgtgctggaggaggcggccgtctcgaac
taccgaggccacgccggttacctgctgtgcgtggactggtcgcccgtcgaccccgacgtg
atctggaccggcgggaaggacttcaccgtgcaggagtggaacatctccaaacaggagttc
acgaagccccccaaagggaagaagatggtggacctgagggagaagaagaagaccaacccc
aagcagaagaagggcaacaagaaggcgacgggaggcggagggtccgcgtcgccggaggcg
aacggagagccggctacggggggcgcgaaagcggcgacgcgacaggagctgtccggggaa
gacgagagggagggagtcgtcggcgcgacgacgagcggcccggcgacgagcggcccggcg
acgccgccgccagccacttttgagatgcaaagaaaatcctccgctgctgtaaagagtaaa
gaaaagccagactccaccgtgctgaagaagaagaagcctcgttccatgctgcccctcagc
acctccatggaccaccggcccaaagaggagctgctgcgggactgcatcactctggcgtcc
gtcagacacgacgacgcgccccctgcaggctgcgtcccgggccgaggagaccacatccat
ctgggcctgttcgctgacagacaggctctgtaccacatgtttgaggcagaagaggagggc
cacgtggaggcgggccactacgactcggtcgtgtacctgcggctgtggagcggagacctg
cagggggcgctgcagctcgccacggagcgaggggagctgaacgaccacctgctctccgtc
gctcccatggccgggttcgaggcgtggagccgggcggcggaggccttcgtcaagcagctc
tgtctgcaggagcagtacctgaaggcagcgtcccacctgctgtcaatcaacaaagtgtac
gaggccgtcgacctgctgcgctctcacaagctctacagggaggccatagctctggtcaaa
gccaggctgccagcggacgaacccgcgctgaaggagctgtacacctgttgggccgccatg
ctggagaaagacggacatttctccgcagctgctaaatgtcacctcgctgccggcgccagc
ttcgacgcggccaaagtgatcgccaggaagaacgacgtgccgtcgctgagggcggcggcc
ggcctcgccaggatctcgggggaggcggctctggctcagtcgctggcgctgcgctgcgct
aaagacctggcggccgctcaggactgggtcggagcggacgaagtcctcgactcgcaggac
cgcctgctggtccacaggctgcacctctgcgtcgccgagctgctggccgcgatgctgcag
gacgtcatccccccggctccctgcgtctccggtcacccgtgggcgccgccggggagacgt
cgcatcctggaccacgcgagagacgtttgggaggagcggttcggcgtttcccgcgagtcg
gcgggacaccgcggcgtccgggcgctcctgcaggagctgaagtccgccgagagcccgacg
cccagcgccaacattcccctcagacaggtcctgctgtactcttccctccacctgacccgc
gccgtgctcagctggttgctggacgatgacggacagctgacgaaggagctgtggcaggcg
gcggcctggccgagagacgccggacacttctgggtttctgcagaactctgcaggctgctg
ttccctgacggtgacgtcagtgtctgttccacgaaacaccccaaaaccctccaccccgcc
gaagaagaagccaaagccgccgccagcagtctgcaggcgttcgtccattaccaccgcctg
tacgaacgctggtggaggagctcggcgggcggccagccgacccagaacggaccgtccccc
ccggcggccgaggacgaggcgaaggaccgggcgccgaacggaggaccgtcggggtcggga
gggagcgtctgcccggtggccggcaggctccacgagctggacttcgacgcgtcgctcctg
ctgtccgaggctcacgctgcctatcagctcacccacaggtccgtgagggagatccaggag
cggctggccaccatggtgctgcagcacagccgagtccagggagggcagcccgagcctggg
gagaaacgggacgacggcccctcggccactcccgccgccggggagacgtcggacaaacga
gactcggccgatgccgggaaaagcactgaggaccaggagactctgatgtctttgtccgcc
aagatgaccacgtatcagaaagaactggctgacctgcccaacaccatcaagatgtatcct
cacccggatgttgttgaatgtagcctggtcctcctgcacctcggcaagtcctcggcgtct
ccctccggttccctccaacaagaggccaaagacctgctccacaaatacggaaccagcagc
ccctccgtcctgaaagcctcccggcgactcctctcctga
DBGET
integrated database retrieval system