Brachyistius frenatus (kelp perch): 138635069
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Entry
138635069 CDS
T10614
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138635069 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138635069 (trip12)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138635069 (trip12)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
HECT type E3
138635069 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
TBCA_PH
Motif
Other DBs
NCBI-GeneID:
138635069
NCBI-ProteinID:
XP_069578516
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVTGRLQSEQVKHKANSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDDPEAAGTSEQERPGHQSKSEGTRGLKRSEAP
DQISSFGPTPAKKPKSLTPPGDNTSETKKGPAKSKKRSLPSEPPASSGRGQSKKSAATGA
SPIQKRKKADSLPGLSSTAGSLSNRTESRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGGHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKACQ
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTATEQ
LNLQVDGGMECLVEISSIVSESDVSSFEIQHSGLVKQLLIYLTSSADRDLLSRDVRLKRF
LHVFAGCPVPGMEPVGRLDPTGNAPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVINPLETYLTSEPPETITFDDPSLEVNLLLRVLHSISRYWFYLYDNAAC
KEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGNQEGTKYMFSSR
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRQEMSIS
SHDLVNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagttacgggaaggttgcagtcagagcaagtcaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccaca
gccagctctgccactggccagtccagagggcacagctcaagaagaagcggtcttactctg
tcagtggcttcatttgtgttgcaagacgacccggaggctgcaggaacatctgaacaagag
cgaccaggccaccagtcaaagagtgaaggcacccgagggctgaagcgaagcgaagctcct
gaccaaataagtagctttggaccgacccctgccaagaagcccaaatcgctcacaccacct
ggagacaatacctcggagaccaagaaaggcccagctaagtccaagaagagatcacttccc
tcagaaccacctgcatcgtcaggtcgaggtcagagtaagaagagtgcggccactggggcc
tcaccaatccagaaacggaagaaagcagactctctccccggtctaagtagcaccgctggg
tccctctccaatcgtaccgagagcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcctcttcctctgcctccacc
tcctcttcttcttccaccacaggcactaacagcgccaccacgcagggcgcccgagtcaaa
caaggaaaagatcagaccaaggcacgtcgctctcgctcagcatctagtccctccccacgc
cgtagtacacgggacaaggagcaggccaaaactgccagctcttcaaagtttgagtgggca
gcacgctttaaccccaaagtcaacctgccaaaacccaaactgtccttgcccggatcctcc
aaaactgagacctccaaacctgggccatctggattacaagctaaactagcaagtttgagg
aaatccaccaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctggga
aagcgcggggcagccgacgcgcgccgacaggagaaaatggccgactccgacaacaaccaa
gatggggccaactcatcagccgctcgtaccgatgaggcgtcacaaggggcttcagcttca
agctcagttgctggagcagtgggtatgaccacctctggagagagtgaatcggatgattct
gaaatgggaaggcttcaagccctattggaggccagaggtctcccgccacatctttttggg
cccctaggaccccgcatgtcacaactgtttcacaggaccataggcagtggagccagttcc
aaggctcagcagctactgcagggcctgcaggccacaggtgacgagtcccaacagctccaa
gctgcgattgagatgtgccagctgttggtgatgggcaatgaggaaacactcggtggattt
cccgtcaagagtgtggtgcccgctctgattacactgttacaaatggagcataactttgat
attatgaatcatgcgtcacgtgcactcacttacatgatggaggctctccctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccagtttatt
gacgtagcagagcaggcactgactgccttggagatgttgtcacggcgacacagcaaagcc
attttgcaggctggtgggcttgctgactgcctcctctatctggagttcttcagcatcaat
gctcagaggaatgccttggccattgcagctaactgctgccagagcattactccagatgag
ttccactttgtcgctgattctctgccactgttgactcagagactcacacaccaggataaa
aagtctgtcgaaagcacttgtctctgtttcgccagactggtagacaactttcaacatgaa
gagaacctgttacaggaggtggcctcgcgggacctgttgaccaacattcagcagctgctg
gtcgtgacgccgcctgtgctcagctcggggatgttcatcatggtcgtgcgcatgttttcg
ctcatgtgctccaactgcccttgcctggcagtccagcttatgaagcagaacatagccgaa
actctgcgtttcctcttgtgtggagcatcaaacggcagctgccaggagcagattgaactg
gtaccccggagcccccaggaactctatgaactgacctccctcatatgtgagctgatgccc
tgcctgcccagagagggcatctttgcagttgatgtaatgctgaagaagggaagtgcccag
acaaccgagggagcgatctggcagtggagggatgaccgaggactctggcatccttacaac
cgcattgacagccgcattattgagacagcgcaccagaacggggaagatgagatcagcttg
tcgaccctgggccgcgtgtacacaattgacttcaactctatgcagcagatcaatgaagac
acaggaacagcacgtggtatccagaggaagcccaatcctctcgccaaccccaacacaggc
ggtcaccaagaggtccgccgggaagatgcacgagcccagttgatgaaggaggatcctgaa
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcatcg
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagctgctaaaggatgtgctgaggaaccatgccgtgtccagtcacatcgcctcc
atgctatccagccaggacctgaagattgtagtgggttctctgcagatggctgagatcctt
atgcagaagctgcctgatgtcttcagtgtctatttcagaagagaaggtgtaatgcaccag
gtgaagaacctggcagagtctgagagctttctcgtcaccagtcccccgaaggcttgccag
agtggcaccgctagtctctgcactaccaccatcagcactgcatccaccacctctgctaat
aatgcaactcctgacctgggatcacccagcttccagcacagcatggacgactcactggac
ctcagcccacaggggcggttaagcgatgtcctcaagaggaaacgactacctaaaagaggg
cccagaagacccaaatactctcccccaagagatgatgataaagtagacaatcaggccaaa
agccctaccagtacccagtcgcccaaatcatccttcttggccagtctcaatcccaagacc
tgggggaagctgggtgcccagaccaacaacgccaactcggagccctcacgcacagcgggg
gtgagtggcctggcaagggcaccgcccaaggactccatttcaaataacagagacaaaata
aaggcctggatcaaagaacaggcaagtaagtttgtggagcgctacttcaactctgaaaat
gttgacggcagcaaccctgcgctgaatgtgctccaaagactttgcacagcaaccgagcag
ctcaacctgcaggtggacggtggcatggagtgcctcgtggagatctccagtatcgtatca
gaatctgatgtgtcgtcctttgagatccagcacagtgggctggtgaagcagctcctgatc
tacctgacctccagcgcagacagggatttgctgagtcgcgacgtacggctcaagaggttc
ctccacgtgttcgctggctgtccggtcccaggaatggagcctgtaggtcgtctggaccca
acaggaaacgcaccttacctggcactggtgcacaagatgaacagctgtctgagccaaatg
gagcagttccctgtcaaggtgcatgacttccccagtggcaacggcaatggcagcagggga
tctcaagcactgaagttcttcaacacacatcagctcaagtgtcagctgcagagacaccca
gactgcaccaatgttaaacagtggaaaggcggccctgtgaagattgacccgctggccctg
gtgcaagccattgagcgataccttgttgtcagaggatacggccgaatcagggaagaggac
gaagacagcgacgatgacggctcagatgacgaaatagatgaatcgctggcggcacagttc
ctgaactctggcagcgtgcgtcacagactacagttctacattggtgaccacctgctaccg
tacaacatgacagtctaccaggctgtacggcagtacagccttcaagcagaagaagaaagg
gagtcgacagatgatgaggcaaacccgcttgggcgagctggcatctggaccaaaacacac
acaatatggtataagcccgtgagagaggacgaggacggaagcaaagacgccgtgggtgga
aagagaggccgagcacagactgctcccaccaaaacctcacctcgcaacgccaagaagcag
gacgagctgtggcatgatggtgtctgtcccagcgtcatcaatcccttagagacatacctc
acttcggagccaccagagaccataacctttgatgacccttccttagaggtcaacctgctg
ctgagggtcctccactccatcagtagatactggttctacctgtatgacaatgctgcgtgt
aaggaaattattcctaccagcgagttcattaacagtaaactgacagccaaagccaaccgt
cagctacaagacccgctggtcatcatgacgggaaacatccctacttggctcatcgagctt
ggaaagacctgccccttcttcttcccctttgacacccggcagatgttattctatgtaact
gcctttgatcgcgacagagccatgcaacgcctgctggacacaaaccccgagatcaaccaa
tcagattctcaggacagtagggttgcgccacgcctcgacaggaaaaagaggacgataaac
cgtgacgagctcctaaaacaggcagagtctgtaatgcaggaccttggcagctccagggca
atgctggagatccagtatgagaatgaggtgggcacaggtcttggacccactctggagttc
tatgctctggtgtctcaggagcttcagcgagctgatctcggcctgtggagaggcgaagag
gttactctggccaatcctaaaggaaaccaagagggaacgaagtacatgttcagctccaga
ggactgtttgccgttccctttggcaggacaaccaaaccagcgcacatagccaaaatcaaa
atgaagttccgtttcttagggaagctgatggccaaagccatcatggacttcagactgctg
gacctccccctggggctaccattttataagtggatgctgaggcaggagatgtccataagc
tcccacgacctggtgaacattgatcccagcgtggccaagtccatccagcacctggaggat
ataatccgccagaagaagaggctggaacaggaccgctcgcagacgagggagaccctgcag
caggctctggagagcctgaacatgaacggctgctcagtggaggacctgggtttggacttc
acccttccaggattcccaaacattgagctgaaaaagggtggcaaagatgtcccggtcaca
atctacaacctggaggaatacctcaggctggtggtgtactggactctaaatgaaggagtg
tccagacaatttgagtcatttagagaaggatttgagtcggtcttccccttgcatcacctg
cagtatttctatccagaggagcttgaccagttgctgtgtggcagcaaatccgagacgtgg
gacgtcaagacgctgatggagtgctgtcgaccggaccacggatacacacatgacagccgg
gcagttcggttcctgtttgaggtgttgagcagcttcgatgccgagcagcagagactcttt
ctgcagtttgtcacaggaagtccaagactgcctgtcggaggtttccggagcctgaatccc
cctctgacgattgtgaggaagacgttcgagtcaacggagaacccggacgacttcctcccc
tcagtcatgacctgcgtcaactacctgaagctgcctgactactccagcatagagatcatg
cgagagaaactgttgattgcggctcgcgagggccagcagtctttccacctttcctga
DBGET
integrated database retrieval system
