Brachyistius frenatus (kelp perch): 138635237
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Entry
138635237 CDS
T10614
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138635237
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138635237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
138635237
NCBI-ProteinID:
XP_069578714
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MSCCSTDVKENHHVDRLVSKDRVAALAAGGGGKRPLEEGNNGHTHSWYRPKKRKKVPGPV
LPKNALMQLNEIKPGLQYRLLSQTGPVHAPVFVMTVEVNGQLFDGSGPTKKKAKLTAAEK
ALRSFVQFPNASEAHIAMGRTLSVHTDFTSDQADFPDPLFNAFETPAPIDDPFYLNSNGS
FSSLGVKDPLLPSPVQNLAHNPIQSPLPPPPSTLIPPTSAKNSVMILNEMRPGLRYDFVS
ENGESHAKNFVMSVTVDHQNFQGSGRNKRLAKARAAQAVLSTLFNMNLDQEPSQQPIPRE
GLQLHLPQVLANAVSRLVVEKFSELTDNFTSPHARRKVLAGVVMTTGADVKDAQVICVST
GTKCINGEYMSDRGLALNDCHAEIVARRSLIRFLYSQLEHFLSNSEEEHHTSMFTRCDSR
QGFRLKDHVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTI
PVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGFQGSLMSYFTEPIYFSSIILGSLY
HADHLSRAMYQRITEMEDLSPSFSLNRPLLSGISNAEARQPGKAPNFSVNWMVGDTGLEV
INATTGKDDLGRPSRLCKHALYRRWMRLHCKLSSTLRIRTLRPSSYHEAKQAALEYHSAK
QTLFRSFLKAGLGVWVKKPIEQDQFALTS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagttgctgcagcaccgatgtgaaggagaaccaccacgtggacagactggtctccaaa
gaccgggttgcagctctggctgctggagggggggggaagcggcccttagaggaggggaac
aacggacacacacactcctggtaccggcccaagaagaggaagaaggtccccgggcctgtt
ctgcccaagaacgccctgatgcagctgaacgagatcaagccgggcctgcagtaccggctg
ctgtctcagaccgggccggtccacgctccggtcttcgtgatgaccgtggaggtcaacggg
cagctcttcgacggttccggtccgaccaagaagaaggccaagctgaccgcagcggagaaa
gcgctgcgctccttcgtccagttccccaacgcgtccgaggcccacatagcgatgggccgg
accctgtcggtccacacggacttcacctcggaccaggctgacttcccagacccgctcttt
aatgctttcgagacccccgccccgatagacgatccgttctacctgaacagtaacggttcc
ttcagctcactgggagtaaaggatccgctgctgccctccccggtccagaacctggcccat
aacccaatccaatcccccttacctccacccccctccaccctcattcctccaaccagtgcc
aagaactcggtgatgattctgaacgagatgcggccgggcctcaggtatgactttgtgtcg
gagaacggggagagccacgccaagaacttcgtcatgtcggtgacggtggaccatcagaac
ttccagggttctggacgaaacaagaggctggccaaggctcgggccgcccaggctgttctg
tccactctctttaacatgaacctcgaccaggaaccatcacaacagcccataccgagggag
gggctgcagctgcacctgccacaggtccttgcaaacgccgtctctcgtctggtcgttgag
aagttcagtgaactgactgataacttcacgtctccacacgctcgacggaaagttctggca
ggtgtcgtcatgacaacaggtgccgatgtgaaggatgctcaggtgatctgcgtgtccacg
gggacaaagtgcatcaacggtgaatacatgagtgacagaggtctggccctcaacgactgc
cacgctgagattgtagctcgtcgctctctcatccggttcctgtactcccagctggaacat
ttcctcagtaacagtgaagaggagcaccacacatccatgttcaccaggtgtgacagcaga
cagggcttcagactgaaggaccacgttcagttccacctgtacatcagcacctctccctgt
ggggacgcccgcatcttctctcctcatgaagctggagtggaggatcagggagacagacac
ccgaacaggaaggcccgcggccagctgcgcactaagatagagtctggtgaaggaaccatc
cctgttcgctccagtaacaccatccagacgtgggacggcgtccttcagggcgagaggctg
ctcaccatgtcctgcagtgacaagattgccaggtggaatgtggttggattccagggttct
ctgatgagctacttcactgagcccatctacttctccagcatcatcttgggcagcctgtac
cacgccgaccacctgtccagagccatgtaccagaggatcactgagatggaggacctgtct
ccgtccttcagcctaaacaggccgctgcttagcggaataagtaacgctgaggctcgtcag
ccagggaaggcaccaaacttcagtgtgaactggatggtgggagatacaggcctggaggtg
atcaatgccaccacggggaaagatgatctaggtcgaccctccaggctttgcaaacatgcc
ctctaccgccgctggatgcgtctgcactgcaagctgtcctccacccttcggatcagaaca
ctgaggcccagcagttaccacgaggccaagcaggcagcgctggagtaccactccgccaag
cagacactctttaggtccttcctcaaggcggggctgggcgtctgggtgaagaagcccatt
gagcaggaccagttcgccctcacctcctga
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