Brachyistius frenatus (kelp perch): 138635325
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Entry
138635325 CDS
T10614
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03440
Homologous recombination
bfre03460
Fanconi anemia pathway
Brite
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138635325 (brip1)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
138635325 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
138635325 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138635325
NCBI-ProteinID:
XP_069578846
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MAASAVEYTIGGVKIHFPCKAYPSQLAMMNSIVRGLNSGQHCLLESPTGSGKSLALLCSA
LGWQRAQQAKLKEGGDAADDKSQSDKNGGDFKKPDGLTPCQCVCHSKAGGPAAAAAAEPA
VVDLTESPCKQTSQPPPPAPQHATSPEESPLRKPSVASRLSEKFQASLRSDCQTDDDFQP
DRKRIRSAESQSRKKQRLERGVIFIDDEPQLEQQPSGPWSWRAESSSPAAGRSSSCCAPE
ACSKCPCAATKDGGKDKDGKKKIPKIFFGTRTHKQITQIAHELQRTVYTGVPMTILSSRD
HTCVNPEVAPHFNRNERCKELLEAKDGRSCRYYHGVHKMRDQNALQYVHGQHGAWDIEDL
VALGKRLRSCSYYAARELKQSASIIFCPYNYLLDPMIRESMEINLEGQILVLDEAHNIED
CARESASCTFDLKSLLMSRDELDSMVNNNIRRSQHEPLRDFCYSLINWIQQSQSLLSDRG
YESSCKVWSGTQILSIFHSLGITADSFKVLKQNLAAVLEKEERVGVVNGKEDMVQIPTIS
TPTAIVLKNLFMVLDFLYRDSCRFADDYRVALQKSYAWTNQVPPDVPDANGFFVRPRQRQ
RQSIRVKTEVLTLSFWCLNPAVAFSDLSGSVRSIVLTSGTLSPMGSFSSELGVKFSIQLE
ANHVINKSQVWVGTVGAGPRGRQLCATFQHVETYAFQDEVGALLLHVCQVMAKGVLCFLP
SYKMLDKLRERWTNTGLWEKLEQKKTVITEPRGGAKGDFDELLQMYYDAIKYCEERDGAL
LMAVCRGKVSEGLDFTDDNARAVLTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGNRW
YEIQAYRALNQALGRCIRHKNDWGALILVDDRYRKNPNKYITGLSKWVRQLVRHHDTFSG
AMESLVEFSQVQQKVEVKAEVKTAPPPDSQTLGTTVPSPSHQGRSPAEASQFQRSSSCVK
SPEAQQNTSPSSFHFFTRTQLRVEQNEKAERWKMLHGPPAEPLSRQKRAARLLYPLFTSS
PVSASLKKPIFKGKTGGPLNPDSQASGHADKENHQRTTSFPLLRTGAGDGSRETKVGPQD
VSAVPARPSCESETASADNLDEDDEDQTVFFTPELFEEDEDSPETETRTDCPPRTGTGTE
SADPLQARGRAAAPDGQSAASGREESVELSQGQREKEIRGQKQGEGGQEVQAPSRQTGSW
LRRLSRSWQKAPATPTGGLVEGRHVGRVTVQQIETKRRTNSIRAGHELKVVTQGWKSRPS
RTRAVGAQRSDGPHQERGSAEVQENSWTSPQQTEASLKASVTSSQESERPSVNTPVADAA
STPVRPSGAEFEVVTPQPDDIITELRAAAGRPAEAPRSQHSRTKVIKVQRSYKQKRRRFK
KNSPKTTSITELQPCSLGLHCSLCEKELLPVVPGTLRRAACEREHLAFLRRDRFVAAAPT
RRCRCDPHHPSSPDDSLLLVQSAASLQVLRTALQPDRSDGFTAYNAIWSPEENSITRFLQ
CKRCSSLHPVLPAALIAAEVQYPADRARDQIWLTPAAVHFCSLIHIKS
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatccgcggtggagtacaccatcggcggggtgaagatccacttcccctgcaag
gcttacccgtcccagctggcgatgatgaactcgatcgtacgcgggttgaactccgggcag
cactgtttgctggagagtcccacgggcagtgggaagagtttggcgttgctctgctccgct
ctgggctggcagagagctcagcaagctaaactgaaagagggaggagatgctgcggacgac
aagagtcagtcagataaaaacggtggagactttaagaagccggacggcctcacgccctgc
cagtgtgtgtgccacagcaaagctggcggaccggcggctgcagcagcagctgaacctgcc
gttgtggacctcacggagtcaccctgcaaacagacgagtcagccgccgcctccagctcct
caacatgcgacatcacccgaagagtcgccactcagaaagccttctgttgcctctcgtctg
tcggagaagtttcaggcgtctctccgctccgactgccagacagacgatgacttccagcca
gacaggaaacgcatccgctctgcggagagccagagccgtaaaaagcagcgtctggagcgc
ggagtcatcttcatcgatgacgagccgcagctggaacaacaaccatcaggtccttggagc
tggagagcagagagcagcagcccggcagctggccggtcctcctcctgctgcgcccctgaa
gcctgctccaagtgcccgtgtgcggcaaccaaagacggtgggaaggacaaagatggcaaa
aagaagatcccaaagatcttcttcggcactcgcacgcacaaacagataactcagatcgcc
cacgagctgcagcgcaccgtctacaccggtgtgcccatgaccatcttatccagccgagat
cacacctgcgtcaacccagaggtggcgccgcacttcaaccgcaacgaacggtgcaaggag
ctgctggaggccaaagatggccggtcatgccgttactaccacggagtccataagatgcgg
gaccagaacgcgctgcagtacgtccacgggcagcacggcgcctgggacatcgaggacctg
gtggcgctgggcaagcggctgcgctcctgctcttactacgctgcacgggaactcaagcag
agcgcctccatcatcttctgcccgtacaactacctgctggacccgatgatcagagagagt
atggagatcaacctggagggccagatcctggtgctggacgaggcccacaacatcgaggac
tgcgccagggaaagcgccagttgcaccttcgacctcaaaagtctgctgatgtcccgagac
gagctggacagcatggtcaacaacaacatccggcgctcccaacacgagccactcagggac
ttctgctacagtctgatcaactggatccagcagagccagagtctgctgtctgaccgcgga
tatgagagctcctgtaaagtctggagtgggacgcagatcctgagcatctttcacagtctg
ggcatcaccgctgactccttcaaagtgctgaagcaaaacttggctgcggtgctggagaag
gaggagcgtgtgggcgtggttaacggtaaagaggacatggtgcagatcccgaccatcagc
acgcccaccgccatcgtcctcaagaacctgttcatggtgctggacttcctctacagggac
agctgcaggtttgctgatgactaccgggtggctttgcagaagagctacgcctggaccaat
caggtgcctcctgacgtccctgacgccaacggcttcttcgttcggccacgccagcgccag
cgccagagcatccgagtcaagaccgaagtcctgacactgagcttctggtgcctcaacccg
gctgtggctttctccgacctgagtgggtcggtgcgcagcattgtgctgacgtcaggaacc
ctgtcacccatgggctccttctcctctgaactgggagtgaagttctccatccagctggag
gccaaccatgtgatcaacaagtcccaggtttgggtcgggacggtcggcgcaggaccccga
ggcagacaactctgtgccaccttccagcacgtagaaacgtacgctttccaggacgaggtg
ggcgcgctgctgctgcacgtctgccaggtcatggccaagggtgtgctctgctttctgccc
tcctacaagatgctggacaagctgagagagcggtggaccaacacgggtctctgggagaag
ctggagcagaagaagacggtgatcacggagccccgcggtggcgccaagggggattttgac
gagctgcttcagatgtattacgatgccatcaaatactgtgaggaaagagatggcgccctg
ctgatggctgtgtgtcgggggaaagtgagcgaagggctggactttacagatgacaatgcc
agggcggtgctcaccatcgggattcccttccccaacatcaaagacctgcaggtggaactg
aagatgaagtacaacgaccagcactgcaagtccagaggtcttctcccgggtaaccgctgg
tatgagattcaggcctacagagctctgaaccaggccctggggaggtgtatccgccacaag
aatgactggggtgccctgattctagtggatgaccggtacaggaagaatcctaataagtac
atcacaggtctgtctaaatgggtccgccagcttgtccggcatcacgacaccttcagcggc
gccatggagtctctggtggaattctctcaggtgcagcagaaggtggaggtgaaagcggag
gtgaagacggcccccccaccagacagccagaccctcggcacaactgtcccgtctcccagc
caccagggacggagtccggccgaggcctcgcagtttcagagatccagctcatgtgtgaaa
tcacctgaagcccagcagaacacgagcccctcctccttccactttttcactcgtacacag
ttgagagttgaacagaatgaaaaagcagagcggtggaagatgctgcacggtccaccagct
gagccgctctcacgtcagaagagagcagctcggcttctgtaccccctcttcacctccagc
cccgtcagcgccagcctcaagaagcccatctttaaaggaaagaccggcggtcctctcaac
ccagactcgcaagcatccggtcatgcagacaaagagaaccaccagagaaccacctccttt
cccctactgaggaccggggctggagacggttccagggagaccaaagtgggtccacaggat
gtatctgctgtaccagcccgtcccagctgtgaaagtgaaacggcctcagcagacaacttg
gacgaagatgacgaggaccagacagttttctttactccagagctgtttgaagaagacgaa
gacagcccagagacagagacgaggacagactgccctcccagaacggggacagggacggag
agtgccgacccgctgcaggcccgagggcgagccgctgctcctgatggacagagtgctgct
tcagggagggaggagagtgtcgagctgtcacagggacagagagaaaaagagatcagagga
cagaagcaaggtgaggggggacaggaggtccaagccccgagcaggcagacgggcagttgg
cttcgcaggttgtccaggtcgtggcagaaagctccagccactccaacaggtggactcgtt
gaaggcaggcatgtagggagagtcactgttcagcagattgagaccaagagaaggaccaac
agcatcagggcaggtcacgagttgaaggtagtgacccagggttggaagagcagaccgtcc
agaaccagagctgtcggagcacagcgctcagacggtccccatcaggagcgtgggtcagca
gaggttcaggaaaacagctggacgtcacctcagcagacagaagccagcttgaaagcgagc
gtcacctccagtcaggagtcagaaaggccttctgtgaacacacctgtggccgacgcggcc
tccacacctgtcagacccagcggagccgagttcgaggtcgtgactcctcaaccagacgac
atcatcacggagctgcgagcggctgctggtcgtccggcggaggctccgaggagtcagcac
agcagaacaaaagtcataaaagtgcagagatcttataagcagaaacgcaggagatttaag
aagaactctccgaaaacaacgagcatcacggagctgcagccgtgctctctgggacttcac
tgttctctgtgtgagaaggagcttcttcctgtggtaccgggcactttacgacgtgctgcg
tgtgaacgtgaacatcttgcttttctgagaagagaccgatttgtggcggcagcgccgacc
cgtcggtgccggtgtgatccacatcatccgtccagcccagacgactctctgctgctggtc
cagagcgccgcgtcgctgcaggtcctgaggaccgcgctgcagccggaccgcagcgacggc
ttcactgcctataatgccatctggagccccgaggagaactccatcaccaggtttctgcag
tgcaaacgttgctcctccctccaccccgtcctgcctgcagctctcatcgccgcagaggtc
cagtaccccgcagaccgggctcgagatcagatatggttgaccccagctgcagtccacttc
tgctctctcatccatatcaaaagctga
DBGET
integrated database retrieval system
