Brachyistius frenatus (kelp perch): 138635410
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Entry
138635410 CDS
T10614
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138635410 (ddx1)
03016 Transfer RNA biogenesis [BR:
bfre03016
]
138635410 (ddx1)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138635410 (ddx1)
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138635410 (ddx1)
Transfer RNA biogenesis [BR:
bfre03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138635410 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
138635410
NCBI-ProteinID:
XP_069578965
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMAEIAQAVEELDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASVKTGGAIFNNWQMNPYDRGTAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVACHDQGLCRVGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDVDKGQISFSKNGNDLGVAFEIPQNLKNQSFFASCVLKNAELKF
NFGGEDFKHPPKSGFVALDKATEDHAVKSSETGSAKVSQVKVSSNAPKALIIEPSKELAE
QTLNNVKQCKKYVDNPKLRELLVIGGVPAKEQLAALEQGIDIVVGTPGRLDDLISTGKLS
LSQVRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQIIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPESVHHVVVPVNPKNDRLWERLGKSHIRTDEVHAKDNTRPGAN
SAEMWSEAIKMLKGEYTVKAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKGHQF
SCVCLHGDRKPNERKTNLERFKKKEVRLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCPNRGRGCYNTRLKEDGGCTIWYNEKELLS
DVEEHLKCTITQCEPDIKVPVDEFDGKVTYGRRRALGGGNYKGHVDALAPTVQELAVLET
EAQTAFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttttctgaaatgggagtcatggctgaaatagcgcaggctgtggaggagctg
gactggttactacccactgacatccaggcagagtctatcccccttatccttggtggagga
gacgtgcttatggcagcagaaactgggagtggcaaaacgggagccttcagtatcccagtg
atccagattgtgtacgagaccctgaaggatcaacaggagggcaagaagggcagagcctct
gtcaaaactggaggagccattttcaacaactggcagatgaatccttatgatcgcggtaca
gccttcgcgatcggtcctgatggactgtgctgccagagcagagagttcaaagagtggcat
ggctgtcgctccacaaaaggtgtcaccaaagggaagtactactatgaggtggcctgccat
gaccagggtctgtgccgtgtgggctggtccaccagtcaggcagctctggacttgggaact
gataagtatggttttggttttggtggcactggaaagaaatccaacaacaagcagtttgac
agctacggagaggagttcaccatgcatgacactattggatgctacttggatgtagacaag
ggccaaatttccttctctaaaaatggtaatgacctgggtgtggcttttgagatccctcaa
aacctgaagaatcagtctttcttcgcctcctgtgtgctgaagaatgcagagctgaagttc
aactttggaggagaggactttaaacatccccccaagagtggttttgttgccctggacaag
gcaacagaggatcatgcagtcaaatcctctgagacaggaagtgccaaagtgagtcaggtg
aaagtgtcatccaacgcccccaaagctctgatcatcgagccatcgaaggaactggctgaa
caaaccctcaacaatgtcaagcaatgcaagaaatatgtggataaccccaaactcagggaa
ctcctggtgatcggtggcgtgcctgccaaagagcagctggctgctctggaacaggggatt
gacatcgtggtgggaacacccggcagactggacgatctcatatccaccgggaaactcagt
ctgtcccaagtccgcttcctggtgctggatgagtgtgacggcctcctgtcagccggatat
acagacttcatcaataggatccataaccaaatccctcaggtcacctctgatggcaagaga
ctgcagatcattgtgtgttcagccacactgcattcatttgacgtgaagaagttgtccgag
cgcatcatgcacttccctacttgggtggacctgaagggggaggactctgttccagagagt
gtccaccacgtggttgtgcccgtcaatccgaagaacgaccgtctgtgggagcgcctgggc
aagagccacatccggactgacgaggttcatgccaaagataacaccagaccaggagccaac
tctgcagagatgtggtcagaagccatcaagatgctgaagggcgagtacaccgtgaaggcc
attaaagagcacaaaatggaccaggctataatcttctgtcgcacgaagatcgactgcgac
aacatggagcagtacttcattcagcaaggaggaggtccggacagtaaaggtcaccagttt
tcctgcgtttgtctccatggtgatcgaaagcctaatgagcggaagactaacttggagcgc
ttcaagaaaaaagaagtgagactcttgatctgcactgacgtagctgccagaggaattgac
atccacggagttccttacgtgattaatgtcaccctgccagatgagaagcagaactatgtc
catcgtatcggcagagttggaagagccgagagaatgggactggccatctccttggttgct
atggaaaaagagaaggtgtggtaccatgtttgcccgaaccgaggcagaggctgctacaac
acccggctgaaggaggatggaggttgcaccatctggtacaatgagaaagagctcctgtcg
gacgttgaggagcatctaaagtgcaccatcacccagtgtgagccagatatcaaagtgcct
gtggatgagtttgatggaaaggtgacctacggaaggcgcagggcgttgggaggtggtaac
tacaagggtcacgtggatgctcttgccccgacagtccaggaactggctgtcctcgagaca
gaagcccaaacggctttccttcacctgggatacatgccaaaccaacttttcagagctttc
tga
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