Brachyistius frenatus (kelp perch): 138635483
Help
Entry
138635483 CDS
T10614
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138635483 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138635483 (nup54)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138635483 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
138635483
NCBI-ProteinID:
XP_069579072
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MAFSFGGATSNTAASTSGFSFGSFGAKTAASTAFGFGPAAAAATTTASSGFGTLAAPGFG
AAATTTAAPATGFSFGSTNTGFGGLGAGNTMAGGFSFGGFGLNANPAAVSFNVGCFGTAT
TTGTVFNFGNSLASTGAFGGFGATTTTAAVPGSTFSFAAPANTAGGLFGNAQNKGFGFSS
GLGTGAAAGTSGFGTGLGTTGLGGFGGFNIQPTQQQQGGLFGQQAQQQGQTQPTHLYQQV
TALSAPTLLGDERDTILAKWNQLQAYWGTGKGYYSNNNPPVDFTQENPFCRFKAVGYSCV
PMSKDEDGLVVLVLIKKEAEVRAQQQHLVESLHKVLGSNQTLTVNVDGVKALPNDQTEVI
IYVVERSPNGTSKRIPATTLFGYLEQANVKLQLAQIGVTMSVTRTELSPAQLKQLLQNAP
AGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMNKQHQTRVDIISNDISEL
QKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSEL
NAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSHLISVI
KDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgctacgagtaacacggcggcaagcacgtccgggttttcc
tttggttcatttggtgccaagaccgcggcatcaacagcgtttggcttcggccccgcagcc
gccgccgccaccaccactgcctcctccggattcggcactcttgcagcccccggttttggg
gcagccgccaccaccactgctgcaccagccacaggatttagcttcggctccaccaacact
ggatttggggggctaggagctggaaacaccatggctggtgggtttagttttggggggttc
ggtttaaatgccaacccagcagcagtcagctttaatgtggggtgctttggtacagcaacc
accactggcactgttttcaattttggtaatagcctggctagcacaggtgcatttggtggc
tttggagcaacaacaacaactgctgctgtgccggggtccacttttagctttgctgcccca
gccaacaccgcaggcggcctgtttggtaacgcgcagaacaaagggtttgggttctcgtct
gggctcggcaccggggccgccgctgggacgtcgggatttggaaccggattaggaacaact
ggcctgggtggtttcggaggctttaatatccagccaactcaacagcagcaaggaggcttg
ttcggccagcaggcccagcagcagggacagactcagcccacccacctttaccagcaggtc
actgctctgtcagctcccaccttgttaggagatgagcgcgacaccatcctcgccaaatgg
aaccaactccaggcttactggggcaccgggaagggctactacagcaacaacaacccacct
gtggacttcacacaggagaacccgttctgccggttcaaggcggtgggttacagctgcgtt
ccaatgagcaaggatgaggatggtttagtggtcttggttctcatcaaaaaggaagctgaa
gtgcgagctcagcagcagcatctggttgagtcgctccacaaagtcctggggagcaaccag
acactcaccgtcaatgtagacggtgtcaaagccctgccaaacgaccagacagaggtgatc
atttatgtggtggagcgttctcctaatggcacctccaagcggatcccggctaccacactc
ttcggctatctggagcaggctaacgttaagctccagctcgcccagatcggagtgaccatg
tcagtcacgcgcacagagctgtctccagcgcagctcaaacagctgctgcaaaatgctccc
gccggagtggatcccatcatttgggagcaagctaaggtggacaatcctgacccagagaag
ttaatcccagtgcccatggtggggtttaaagagctgctccgcaggctgcagatccaggag
cagatgaataaacagcaccagaccagagtggatattatctccaatgacatcagtgaactg
cagaagaaccaggcgaccacggtggccaagatcgcccagtacaagaggaagctgatggat
ctttctcacagggtgctacaggtgctgatcaaacaggagattcaaaggaaaagtggatat
gccatccaagtagacgaggagcatctcagagtgcagctggacaccattcagtctgaactg
aatgcccccacacagttcaagggtcggttgaatgaattaatgtctcaaatccggatgcag
aaccactttggagctgtgagatcagaggagcgctacagtgtcgatgcagaccttctcaga
gaaatcaaacaacacttgaaacagcagcaggatggtttaagtcatttgatcagcgtcatc
aaagacgacttggaagacatcaaactcatagagcatgggctgagcgacagcggacacatg
agaggaggcatcctgagctga
DBGET
integrated database retrieval system