Brachyistius frenatus (kelp perch): 138635602
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Entry
138635602 CDS
T10614
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138635602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfre03021
]
138635602
03036 Chromosome and associated proteins [BR:
bfre03036
]
138635602
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138635602
Coactivators
SAGA/TFTC/STAGA complex
138635602
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138635602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
138635602
NCBI-ProteinID:
XP_069579265
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MDGATGITSAAGASLTAAQSQSKPGTASGVVTAAPDVGKPGTSGVQTLNGSTVAVNCHIP
GGVSADSGSSQPAVTLVNNGPVPVSKGGGGGGAAVLSATPSTIFRTTSSAQNAATSSVIS
SQPSAKPVPTVTLVRPPMQTPANASQSAANPTAGLTPPAVSGAAAAATATAGSLVHKLDS
AKSVMQTGVHVVASAVATGTTATTRSPTVLQNLRTSVPSTIAATPPGGVRAIAPQVLAPR
LAQPQQNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQSQSQSAMTPRPAAPTS
TPPVQITSLQAPGTSLLARPVTPTTIIKQGSTVQTTVTATTTLQRPPVLQNTIMLGGTAT
ATGQMLGTPNTVQPGSAAAAVTQRVGPLGATGATVTPTAVTAETLENVKKCRNFLSTLIK
LASSGKQSSETTANVKELVKSLLEAKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALR
QMTPDSEAFIQQSLLPQPSTQPAAAASTALTAVVLRPPLSNATTTPTSTATTKTTVISLT
QTPHSKPGLIVPQQQGTMVRPQVTLAQTPMVTLRGQTPSRIIVGQPQVVKQLQTVPAVKQ
TLAPGARGVQVLNQASLIAAQKNKLKEAGGGTFRDDDDINDVASMAGVNLSEESARILAT
NSEIVGMVTRSCKDETFLTTPSLTRIALEIGKKFGVSELGTDVINYISHATQQRLQNLLE
KVSQVAQQKNMTFKEDERYERASDVRTQLKFFEQLDQMEKQRKEEQEREILLKAAKSRSR
QEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIGPRKKRKMDSPVRGSSAEGSGSG
PSQPGGSSGTGSRQFMRQRITRVNLRDLLFCLENERGTNHSHLLYKGFLK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgaccgggatcacatcagcggcgggagcgagtttgacagccgctcagagt
cagtccaagccggggacagccagcggagttgttacggcggcgccagatgtcgggaaacct
gggacgagcggcgttcaaactttgaatggaagtaccgtggcggtgaactgtcatattccc
ggaggcgtatccgccgacagcggcagctcgcagccggctgtcacgcttgtaaacaacgga
cctgttcccgtgagcaaaggaggaggaggaggaggagcagcagttttgtctgcaacaccg
agtactatatttcggactacctcgagtgcgcaaaacgccgcgacttcgtctgtgatttcc
tctcagccgtctgcgaaacccgtaccgactgtcactcttgtgaggccacctatgcaaact
cccgctaacgcttcgcaaagcgcagccaacccgaccgccgggttgaccccaccggctgtc
agcggcgccgccgccgccgccaccgccacggccggctctctcgtccacaaacttgactcc
gcaaaatccgtaatgcagaccggtgtccacgtcgtggcttcagctgtcgcaacggggacg
acggcgaccacgaggagtccgactgttctgcaaaacttgaggacttcagttccgtcaaca
atcgccgccactcctcccggcggagtacgagctattgctccacaagtgttggcacctcga
ctcgctcagccgcaacaaaacgccccaaatatccaaaacatccagctccctccaggcatg
gtcttggttcgcagtgagagtgggcagctgctgatgattcaccagcagactttggctcag
atgcaggcacagtcgcagtcacaaagcgccatgacgccacggcctgcagcccccaccagc
acaccacctgtccagatcacttctctacaggctccaggtacatcactgctggctcggccg
gtcaccccgaccaccattattaaacaaggttccacagtccagaccactgtgacagccacc
acaaccctgcagaggcctcctgtactgcagaacaccatcatgctgggaggaactgccacc
gccacgggacagatgctgggcacgcccaacacagtgcagcccggatctgcagccgcagcg
gtaacacagagggtggggcccctcggagccactggggccactgtcactccgacagctgtc
acagctgaaacacttgagaatgtgaagaagtgcagaaactttctgtccacgctgatcaag
ctggcatcgagtggaaaacagtcctctgagactacggccaacgtcaaggagctggtcaag
agcctgctggaagcaaagatcgaacctgaagatttcaccagtaggttataccgggagctc
aactcttccccacagccgtacctcgtaccgttcctcaagagaagtctccctgcactccgc
cagatgaccccagactccgaggcctttatccagcaaagcctgctgcctcagccgagcact
cagcctgctgcggcagcctccacggctctcaccgctgtggtgctacgacctcctctttcc
aacgccaccaccacacccaccagcactgccacgaccaaaaccacagtcataagcctcacg
cagacacctcacagtaaacctggactgatagtgccccagcagcaggggaccatggtgagg
ccacaggtgactctggctcagactcccatggtaacgctcagaggacaaaccccaagccgc
atcatcgtgggccaaccacaggtggtcaaacagctgcaaacagttcctgcagtaaagcag
acgttggctccaggggccagaggagtacaagtactcaatcaggcttctctcattgctgct
cagaagaacaagctgaaggaagcaggaggggggactttcagggatgatgatgatatcaac
gatgtggcctcaatggcaggagtcaacttgtcggaagagagtgcccgtatcttagcaacc
aactccgagattgttggcatggtgactcgttcctgtaaggacgagactttccttaccacc
ccttcgcttacccggatagcactagagatcggaaagaagttcggtgtcagcgagttgggc
acagatgttatcaactacatttcacatgctacgcagcagcggctacaaaacttgctggaa
aaggtgtcacaggtggcgcagcagaagaacatgactttcaaggaggacgagcggtatgag
cgggccagcgatgtgcgaacccagctcaaattctttgagcagctggatcagatggagaaa
caaaggaaggaagagcaggagagagaaatcctcttgaaggctgccaagtcccggtcacgg
caagaagaccccgagcaactccgacttaaacagaaggccaaagagatgcagcagcaggag
ctggctcagatcaggcagagagaagccaacctaacggcgctggcagcaatcggcccgagg
aaaaaacggaaaatggactctcctgttcggggttccagtgcagagggctcagggtcaggc
ccctcccagcctggaggctccagtggaacaggctccaggcagttcatgcggcagcgcatc
acgagagtcaacctcagggacctgctcttctgtctggagaacgaaagagggaccaatcac
tcccacctgctctataaaggcttcctcaaatag
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