Brachyistius frenatus (kelp perch): 138635645
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Entry
138635645 CDS
T10614
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
138635645 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138635645 (slx1b)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138635645 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
T5orf172
zf-RING-like
C1_2
FANCL_C
zf-4CXXC_R1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
138635645
NCBI-ProteinID:
XP_069579340
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MVVEVERFFGVYMLYCTNPKHEGRIYVGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
VLVIHGFPSDIAALRFEWAWQHPHSSRRLSHVSRRSRKESSLQFHWRVVSSMLRVAPWSR
LPLTARWLQQEYRMEFEAELQPPLHIPVAFGSVRVKKKLQPSAGGGEEQEEEQEEEQEAL
RCFLCKRPVKVSEKLSCFQPSCGMSSHVTCLARRFLKSEPSHLLPVEGQCPSCRRSVLWG
SLVRHKHGCVGDLEEITPSASRSHWADELQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgaggtcgagcgcttcttcggcgtctacatgctctactgcacgaaccccaaa
catgaaggtcgcatctacgtcggcttcacggtgaacccggagcggaggatcgggcagcac
aacgcggggcggcaccggggcggcgcgaagaggaccagtggacgaggcccgtgggagatg
gtgctcgtcatacacggcttcccctccgacatcgctgctctgaggttcgagtgggcgtgg
cagcaccctcactcctcccggcgcctctcccacgtctcccggcggtccaggaaagagtcc
agtctgcagttccactggcgcgtcgtctccagcatgctgcgggtggcgccgtggagcaga
ctgccgctgacggcccgctggctccagcaggagtaccggatggagttcgaggccgagctg
cagcctcctctgcacatccccgtcgccttcggcagcgtgagagtcaagaagaagctgcag
ccgtctgcaggggggggggaggagcaggaggaggagcaggaggaggagcaggaggcactc
aggtgttttctctgcaagcggccggtgaaggtgtcggagaagctgagctgtttccagcct
tcctgcgggatgagcagtcatgtgacctgtctggcccgacgcttcctgaagtcggagccg
tcccacctgctgccggtggagggacagtgtccgtcctgccgccgctcggtgctgtggggg
agcctcgtccgccacaaacacggctgcgtcggagacctggaggagatcacgccgtctgca
tcccggagccactgggccgatgagctgcagcgatga
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