Brachyistius frenatus (kelp perch): 138635869
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Entry
138635869 CDS
T10614
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138635869 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138635869 (hbs1l)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138635869 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GTP_EFTU_D4
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
138635869
NCBI-ProteinID:
XP_069579651
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MSRHRNVRGYNYDEDFDDDDIYGQSVDDDYSCISPATANQFIYSRQERQAPKEERLEEEE
YEEEDVPMSPTINHTLDPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIKSGFDPQKALD
AVLSEDTKTAPVTRSTAEETASVARVNQDKPPLPQRTRQEATAEKAKSRDASHNKLDSTE
VVAKVARMTISGKKQTMGFDVPSTGENGVVATSVRRGGSPENATVTPAAEAASKRPETPL
KGTNGDEPSTGPTPSRSSGKARQAINVKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHL
LYLLGNVNKRTMHKYEQESKKVGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVV
TLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQ
LAVAVNKMDQVNWQQERFQEITSKLGHFLKQAGFKESDVFYIPTSGLSGENLVAKSSVSQ
LTSWYSRSSLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDKL
LAMPPNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTR
FRARILLFNIEVPVTQGFPVLLHYHTVSEPATIRKLISILHKNGEVLKKKPKCLTKNMSA
IVEIQTQRPVSLELYKDFKELGRFMLRYVGSTIAAGIVTEIKV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcgaggctacaactacgatgaagactttgacgatgatgac
atatatggacagtcggtggatgatgactacagctgcatatccccagcaacagcaaatcag
ttcatttactctcgtcaagagaggcaagcaccaaaagaggagcgcttagaggaggaagaa
tatgaagaagaggatgttcccatgtcacctaccatcaatcacacccttgaccctcttgat
caagccaagctctactcctgtctggaccatatgcggactgtgctgggagacgcagtgcca
gactccgtcctgacccaggccgctataaaaagtggattcgacccccagaaggcactggat
gcagttctgtctgaagacaccaaaacagccccggttaccagaagcaccgctgaggagacg
gcttcagtagcaagagtcaaccaggacaaaccgccgcttccacaaagaaccagacaagag
gccacagctgaaaaagctaaaagcagagatgcatctcacaataaactggactcaactgaa
gttgtagccaaagtggcccgcatgaccatctctggcaagaagcagaccatgggcttcgat
gttcccagcacaggggagaacggcgtcgtcgctacttcagtgcgccgaggcggcagccct
gaaaacgccaccgtgacacctgccgccgaggccgcctccaaacgtccggagacgccgctg
aaagggacgaatggggacgaaccctccacaggtcccaccccaagccgttcatcggggaag
gctcggcaggccatcaatgtcaaagccgagctggagaagagacaggggggcaaacctctg
ttaaatctggtagttataggtcacgtggatgcaggtaagagcacactgatgggccacttg
ctttatctactcggcaacgtcaacaagcgcaccatgcacaagtacgagcaggagtcgaag
aaggtgggaaaagcctcctttgcctatgcttgggttctggatgaaaccggcgaggagagg
gacagaggtgtgacgatggacgtaggcatgacgaagtttgagacgaactctaaagtggtg
actctgatggatgcaccaggccacaaagatttcattcccaacatgatcacaggagctgca
caggccgatgtggcggttcttgtggtggatgccagcagaggagagtttgaggcaggtttc
gaggccggcggtcagaccagagagcatgccctgctggtgcgctcgctcggtgtcactcag
ctggctgtagctgtcaacaagatggaccaggtgaactggcaacaggagcgtttccaagaa
atcacctcaaaacttggtcattttctcaaacaggcaggattcaaggagtcagatgttttc
tacatccccaccagcggcctgtcgggggaaaacctggttgccaagagttcagtgtcacaa
ctcacctcttggtactcgagatccagcctgctggagcagatagatgcattcaaggcccca
cagagatctgtagacaaacccttcagactgtgtgtctcagacgtgttcaaagaccagggc
tcgggcttctgtgttacagggaagattgaggcaggttatattcagacaggagacaaacta
ctggcaatgccgcccaatgagacctgcactgttaaaggaattactcttcacgatgaggct
cttgactgggctgcagcaggcgaccatgtcagcctgacagtcaccggcatggacatcatc
aagatcaatgtgggctgcgtgttctgtgatcccaaagagccaatccgagtctgtactcga
ttcagagcccgaatcctcctcttcaatatcgaggtccctgtcacacaaggcttcccagta
ttgttgcattaccatacagtcagtgagccagccaccattaggaaactaattagcattcta
cacaagaatggcgaggtcttgaagaagaaaccaaagtgtttgactaagaatatgagtgct
attgtggagatccagacccagaggccggtctcactggagctgtacaaggacttcaaggaa
ctgggccgcttcatgctgcgatacgtaggctccaccattgctgcagggattgtcaccgag
attaaagtatga
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