Brachyistius frenatus (kelp perch): 138636148
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Entry
138636148 CDS
T10614
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138636148 (pcdh18b)
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Protocadherins
138636148 (pcdh18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
PAG
Cadherin_C_2
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
138636148
NCBI-ProteinID:
XP_069580113
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MGTQMIQTKGILFSSPLLKLLLLVALVHDTAGKTLKYKVYEEQKVGTVIARLKEDVSGVL
SKLPSSLTFRFRAMQRGSTPFLSVREEDGEISIGTKIDRETLCEKNLNCSIEFDVVTLPT
EYLQLFHVEVEVLDINDNSPHFSRAIVPIEISESASVGMRIPLDGAVDADVRENSLHTYS
LTPNNFFKIDVRTRTDGAKYAELVVMRELDREVQSSYQLQLTASDNGVPPKSGSTLLKIS
ISDSNDNSPAFDEQSYIINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKILE
TFKINPENGHITLIKKVDYETSASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEIN
INLMTPGKEEVAYISEGAPVDTFIALVRVDDIDAGLNGEVVCRLHGHGHFRLQKTYEKNY
MILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPRFEKSRYEVFKS
ENNSPGAYLMTVVASDPDLGTNGQVTYNIVDTLVQGSPISTYVTIDPSNGAIYALRSFDH
EDVSRITFTVQARDGGNAALSANTTVLLTVLDENDNPPVIHSPSLRNHTAELPVWKYASP
GQLITALKVTDRDAGANGEVSCAIVGGNEDGLFVMDARRCELRTNASLEQAPRDVMEIRV
EVQDRGASRLSTGAVLRLSLQETMDILPPLYPTGTSQASLDLSLIIIISLVAVCALLLIV
MVMFATARCSREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTLPVRAH
PRSPSPSPTPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHTTPPVEQVSQLL
SMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMDR
LLGEAFTEIYAPDGQHRPHAAMRLCTEECRVLGHSDQCWMPPLASPGSSSSDYRSNLYIP
GEEARQTADLSQEKTPQPCTDTGPARNQSFSTFGKDLDGEDGAEEEGGVGGEAGDEDLCG
TTSLLSEMSSVFQRLLPQGLDSYVQVNESQKGSSLSGVGVPLTGSLDRRRGHLPGKPSPS
VHQQGVAAWAANTHFQNPGSSIGPSGHHQGGSYHTLKPSTKLSSQSSSHKGAQAPKNSPQ
NSSHTPKPHSSPLLTALVSPTLVQSSPAPVPVAVPGPSSKWLPAMEEIPENYEEDDFDSV
LSHLQGKRSDSRHELVDASELVAEINKLLQDVRQS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggggacacaaatgattcaaaccaaaggaattctattctcttcgccactacttaaactg
ctgcttttggtcgcgcttgtgcacgacaccgccgggaagactctgaaatacaaagtttac
gaggagcagaaagtagggacggtgattgctcggttaaaggaggacgtctctggggttttg
tccaaactgccgagttccctgacctttcggttccgcgctatgcagcggggaagcacgccg
ttcctgtctgtccgggaggaggacggagagatcagcattggcaccaaaatcgaccgtgag
acgctttgtgagaaaaacttgaactgctcgatagagttcgacgtggtcacgctgccgacg
gagtacctgcagctgttccatgtggaggtggaagtgctggacatcaacgacaactccccg
cacttctcccgtgccatcgtcccgatagaaatctccgagagcgcctccgtggggatgcgc
atcccgctggacggcgccgtggacgcggacgtgcgtgagaactccctgcacacgtactcc
ctgacgcccaacaacttctttaagatcgatgtgaggacccggacggacggagccaagtac
gcagagctggtggtgatgcgggaactggaccgggaagtgcagtccagctaccagctgcag
ctcacggcttcggataacggcgtgccccccaagtctggctccactctgctcaagataagc
atctctgattccaacgacaacagcccggcctttgatgagcaatcatacattatcaatctg
ctggaaaactcccccctcgggactctcatcattgatttaaacgccacagatccagacgag
ggcactaatgggaagatagtctactctttcagcagccatgtctccccaaagatcctggaa
acgtttaagataaacccagaaaatggccacattactcttattaaaaaagtggactatgag
accagcgcgtcctacgagctggatgttcaggctcaggacttgggccccaactccattcct
ggactttgcaaaattgtggtgaaagtggtggatgtgaatgacaacaaaccggagatcaac
atcaatctgatgacgcctggcaaggaggaggtggcctacatctcggagggggcgccggtg
gacacgttcatcgctctggtccgtgtcgatgacatcgacgcgggcctcaacggtgaggtg
gtgtgcaggctgcacggccacggacacttccggctccagaagacctacgagaagaactac
atgatcctcaccaacgtgtcgctggaccgtgagaagaggtccgagtacagtctgacggtc
atagcagaggaccgcggctcgccgagcctctccaccatcaaacacttcaccgtccaggtg
ctggatgaaaacgacaatcctccacgcttcgagaagagccgctacgaggtctttaaatcg
gagaacaactctcctggagcgtacctgatgaccgtggtggcctccgatccagacctgggc
accaacgggcaggtcacctacaacatcgtagacactctggtccaggggagccccatctcc
acctacgtcaccatcgacccgtccaacggcgccatctacgccttacgcagcttcgaccac
gaagacgtcagccggatcaccttcacggttcaggcccgcgacggaggaaacgcggcgctg
tcggccaacaccaccgtcctgctcaccgtcctggatgaaaacgacaacccgcccgtcatc
cactcgccctccctccggaaccacacggccgagcttcctgtgtggaagtacgcatcacct
ggtcagctgatcactgcgctgaaagtcaccgaccgcgacgccggcgccaacggcgaggtg
agctgcgccatcgtcggtggcaacgaggatggcctgtttgtgatggacgcccggcgctgc
gagctcagaaccaacgccagcctggagcaggctccacgggacgtgatggagatcagggtg
gaggtgcaggacaggggagccagccggctgtccacaggagccgtcctccggctgtccctg
caggagaccatggacatcctcccccctctgtaccccaccggcaccagccaggcctcgctg
gacctctctctcatcatcatcatctctctggtcgccgtttgtgctctgctgctcatcgtc
atggtgatgttcgccaccgcacgctgcagccgcgagaagaaggacccccgacacaactac
aactgccgggtggcggagaacagctaccagaaccaccccaagaaaccggcccggcagatc
cacaaggccgacatcaccctggtcccgaccgtcaacggaaccttacctgtccgggcacac
cctcgctccccctccccctcccccacacccgagaggggcaccctgggcagcaggcagagt
caccacagccgtcagtcactcaacagcctggtcaccatctcgtccaatcacgtgccggag
aactttgcgctggagctggcccacaccactcctcctgtcgagcaagtctcacagcttctg
tccatgctccatcagggccagtaccagccgagacccagcttcagaggcaacaaatacacc
cgcagctacagatacgccctgaacgagatggacaagttcagcctgaaggacagcgggcgc
ggagacagcgaggccggggacagcgactacgagcccggcagggagtcacccatggaccgg
ctcctcggtgaggcctttacagagatatatgcccctgatggccagcacagaccgcatgca
gcgatgagactctgcaccgaggagtgccgggtcctgggtcactcggatcagtgctggatg
ccccccctggcctcccccggctcctcctcctccgactaccgcagcaacctctacatcccc
ggggaggaagcccgccagaccgccgacctctctcaggaaaagaccccgcagccgtgtacc
gacaccggcccggcccggaaccagagcttctccaccttcgggaaggacctggacggggag
gacggggcagaggaggaggggggagtgggcggcgaggccggagatgaagacctgtgtggg
accacgtcgctgctgtcggagatgagcagcgtgttccagaggctcctcccacagggtctg
gactcgtacgtgcaggtcaacgagagccagaaggggagcagcctgagcggcgtgggcgtc
cccctgaccgggtctctggaccgcaggaggggtcacctgcccggcaagcccagcccctcc
gtccaccagcagggcgtggccgcctgggccgccaacacacacttccagaacccgggcagc
agcatcggcccgtcgggtcaccaccagggcggcagctaccacacgctgaaacccagcacc
aagctcagttcccagagcagcagccacaagggggcgcaggcgcccaagaacagcccgcag
aacagctcgcacacccccaaaccccacagcagcccgctgctcacggcgctggtcagcccc
acgctggtgcagtcctctccggcgccggtgccggtagcggtgccggggccctcctccaag
tggctgccggccatggaggagatcccggagaactacgaggaggacgacttcgactcggtg
ctcagtcaccttcagggcaaacgcagcgacagccgacacgagctggtggacgccagcgag
ctggtggccgagatcaacaaactcctgcaggacgtccggcagagctag
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