Brachyistius frenatus (kelp perch): 138636521
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Entry
138636521 CDS
T10614
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138636521
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bfre03310
]
138636521
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138636521
Nuclear receptors [BR:
bfre03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138636521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
VRR_NUC
Motif
Other DBs
NCBI-GeneID:
138636521
NCBI-ProteinID:
XP_069580669
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MESSPQDSPSEPGRSGSEPATPATESPASLETPTRTHSSSGSTGSTGSGHGKGLSAAVKK
THSSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNASYSCPRQNNCLIDRASR
NRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQGPLPPARPGLGSP
SPGEAESPPPRYTLSSAGLTELPDDAGRYGDGHSPEGGALSSKADSGGGNRGGGGGGGGG
RGGLYLDIQPSPDQSGLDINGIKPEPLCDYGSANGFFPYRSFSNGDASPANMAELDHLAQ
IISKSHLETCQYLREELQQMSWQSFLQDEVEAYWSKPREVMWQLCAVKITEAIQYVVEFA
KRIDGFMDLCQNDQIVLLKAGSLEVVFVRMCRVFDSQNNTVFFDGKFAGPDVFKALGCDD
LITSVFDFAKSLCSLHLSEDELAVFSAFVLLSADRSWLQEKLQVEKLQQKTQLVLQHVLQ
KNQREDGVLSKLKCKVAALRSLCSRHTEKLSTFRSVYPDVVRTHFPPLYKELFGADLELS
LQTSD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccccgcaggattcaccgagcgagccgggcaggagcggctctgagccggcg
acaccagccacggagagcccggcgagcctggagaccccaaccagaacgcacagcagctcc
gggtccaccgggtccaccgggtccggccacggtaaaggtttgtcggcagctgtgaagaag
acgcactcatctcagattgaaatcatcccctgtaagatctgcggagacaaatcgtcaggg
atccactacggcgtcatcacctgcgagggctgcaagggcttcttcaggaggagtcagcag
agcaacgcctcctactcctgtcctcgtcagaacaactgtctgatcgaccgggcgagtcgc
aaccgctgccaacactgtcgtctgcagaaatgtctgacggtgggcatgtcgagagatgcc
gtgaagttcggccgcatgtctaagaagcagcgggacagtttgtacgcggaggtccagaag
caccgcctccagcagcagcaggggcccctccccccggcccgccccggcctcggcagcccg
agcccgggcgaggccgagtcgccgcccccccgctacacgctgtcctccgccgggctcacc
gagctgcccgacgacgccggtcgctacggcgacggacactcaccggagggaggagctctg
tcctccaaggcggactctggaggtggaaacagaggaggaggaggaggaggaggaggagga
agaggaggattgtacctggacatccagccgtctccggaccagtccggtctggatattaac
ggcatcaaaccggagccgctctgcgactacggatcggctaacggcttcttcccgtaccgc
tccttcagcaacggagacgcgtcgcccgccaacatggccgagctcgatcacctggcccag
atcatctccaagtctcacctggagacgtgccagtacctgagggaggagcttcagcagatg
agctggcagagcttcctgcaggacgaggtggaggcctactggagcaagccgcgggaggtg
atgtggcagctgtgtgcggtgaagatcaccgaggccatccagtacgtggtcgagttcgcc
aaacgcatcgacggcttcatggacctctgccagaacgatcagatcgtgctgctcaaagcc
ggttctctggaggtcgtcttcgtgcgaatgtgtcgagtgttcgactcgcagaacaacacc
gtcttcttcgacgggaagttcgcaggtcccgacgtcttcaaagctttaggttgtgatgat
ttgatcacgtcggtgtttgacttcgcgaagagtttgtgttctcttcacctctcggaggac
gaactcgccgtcttctcagcgtttgttctgctgtctgcagaccggtcgtggctgcaggag
aagctgcaggtggagaagctgcaacagaaaactcagttggttcttcaacacgtcctgcag
aagaaccagagagaggacggggtgctgagcaagctcaagtgtaaggtggcggcgctgcgt
tcgctctgcagtcgccacacggagaagctgtcgacgttccggtccgtttaccccgacgtg
gtccggacacacttcccgcctctttacaaggagctgttcggcgccgacctcgaactcagt
ctgcagaccagcgactga
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