Brachyistius frenatus (kelp perch): 138637092
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Entry
138637092 CDS
T10614
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138637092 (ddx20)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138637092 (ddx20)
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138637092 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
138637092
NCBI-ProteinID:
XP_069581675
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAASMKKAAHDIETRTRTDDVLLSEGIDFGSLLLSQTVLDGLSASGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLVLENPTTQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKHHLKKCHIAVGSPGRIKQLIELGMLSTASIRLFVLDEADK
LLEEGSFQEQINWIFSSLPLNKQMLALSATYPEYLAHHLTRYMREPTFVRLNLSDMGLKG
LKQYYKLVHSHPLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCALSLSALPSTIEPGLMDEPCDWDVCT
EATTPGSVSQLFSRTAKKRRTKTEVSLSDSTGNPAVAHRRQTNPEKTHQAHRREAHVEGT
ARKISSTKDTLPQGPPQVTPTRKELQDALPKIPPLSSFKNSGSRFMTFEEAQRDFQNFIT
TGLGRSVEIIREFRGREDGGPEDHIGHTESFTLDDDSAQDLTQNGERREFNSPPQRLISA
SSSSLSDMEENQDEVTLQSSNQTSGGEHGAITKTETRHKPTVPKPSAPRINDQTSRATSG
TALSHPDGRESVQSVKSRRQTALAHTHRDESKKMKKEKPHIKHSEKMKREPKSKKDDEEC
YEEECFDEEEEWSAETYWRTCYRAWNDYYTSMSPFQEQGYQNYYSVAHNWMAAYRMNAIY
MEELLKD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatccatgaagaaagcagcccacgacatcgaaacgcgaacgcggaccgacgat
gtgctcctgtcggaggggatcgacttcggctctctgctgttgtctcaaaccgtgctggac
gggctgtccgcctcagggtttcagaaaccgtccccgatccagctcaaggcgatcccgctg
ggccgctgcggactcgatttgattgtacaggccaagtctggcacagggaagacgtgcgtg
ttctgcaccatcgccctcgactccctagtgctggagaatcctacaactcaggtccttgtg
ttggctcccacacgagagatcgccgtgcagatccactccgtggtgatggccataggctgt
gccatggagggcctggagtgccatgttttcatcgggggcaggcctgtgagccaggacaag
caccatctgaagaagtgtcacatagcggtgggctcgcctggtcgcatcaagcagcttatt
gagttgggcatgttgtcaaccgccagcatcagactgtttgttctggatgaggcagacaag
ctgctggaggagggcagcttccaggaacagataaactggatcttctcctctctgccgttg
aacaaacagatgctggcactctctgccacctacccagaataccttgctcatcacctcacc
cgctacatgagagagcctaccttcgttagactcaatctgagtgacatgggcctgaaaggt
ctgaagcaatactacaagctggtgcactcccatccgttacctcacaaggtttttgaggag
aaggtgcagcacttactggagctgttcagtaaaatcccattcaatcaggctctagtgttt
tccaacctacacacaagggctcagcacctggcagacatcctgtcctccaaaggcttacct
gctgtttgtatctcaggtggtctgagtcaggaccagagactggaggctatgtccaaactg
aagcagtaccaatgccgagtgctgatctccactgacctgacctccaggggtatagatgca
gataaagtcaacttggtgataaacctggatgtgccgcaggactgggaaacctacatgcac
agaattggccgggccgggcgttttggcactcaggggctggcggtgacgtactgttgccat
ggtgaggaggagaacaagatgatggccatcgctcaaaagtgtgccctcagtttgtccgca
ctgccatccaccatagagcctggactgatggatgagccctgtgactgggatgtctgcact
gaggccaccactccaggctccgtatcccagctgttctccagaacagcgaagaagagacgt
acaaagacggaagtttctttgtctgattccactgggaatccagctgtagcccacagacgt
caaacaaatccagagaagacccaccaagcacacaggcgagaagcacatgttgaagggact
gcacgaaagatatcctccacgaaggacactctgccgcagggtcctcctcaagtgacgccg
actcgaaaagagctgcaagacgctctgccgaagatccctcctcttagctcgttcaagaac
agtgggtcacgatttatgacctttgaggaggctcagcgcgacttccaaaacttcatcacc
acagggttggggagatcagtggagatcatcagggagttcagaggccgagaggacggggga
ccagaagatcacattgggcacacagagtctttcacacttgatgatgacagcgctcaagat
ttaacacaaaatggtgaacggagggaatttaactctcccccacagaggttaatttctgct
tcttctagctccctctctgatatggaagagaaccaggatgaagtgacactgcaaagttca
aaccagacttcaggtggtgaacacggagcaattactaagactgaaactaggcataaaccc
actgtgcccaaaccttctgctcccagaataaatgaccagacatcccgtgcaaccagtggg
acagcgttgtctcaccctgatggcagggaatcagtacagagcgttaaatcaaggaggcaa
acggctctagcgcatactcacagagatgaatcaaaaaagatgaagaaagagaaaccgcac
ataaaacactcggaaaagatgaaaagagaaccaaagagcaaaaaggatgacgaagaatgc
tatgaggaagaatgctttgacgaagaggaggagtggagtgctgaaacttactggagaacc
tgctacagagcctggaatgattactacacctctatgtccccatttcaagagcaaggttac
caaaactactacagtgtagcccacaactggatggcagcttatcgaatgaatgccatctac
atggaggagctcctgaaagactga
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