Brachyistius frenatus (kelp perch): 138637295
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Entry
138637295 CDS
T10614
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfre01009
]
138637295 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138637295 (hdac6)
04131 Membrane trafficking [BR:
bfre04131
]
138637295 (hdac6)
03036 Chromosome and associated proteins [BR:
bfre03036
]
138637295 (hdac6)
Enzymes [BR:
bfre01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138637295 (hdac6)
Protein phosphatases and associated proteins [BR:
bfre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138637295 (hdac6)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
138637295 (hdac6)
Membrane trafficking [BR:
bfre04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138637295 (hdac6)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138637295 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
138637295
NCBI-ProteinID:
XP_069581946
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MQSGSEPAGSGLKSVRRSPRLSPQGGGAGSEERKGGGGGLQQVKRRGRMERSIEEEEEEE
LSDRLQTLDLSNRSASSGTGLVYSEIFTRHQNQWEPSHPESPDRVTSIMEELERQELLSH
CVRVEPREAAEEELLLAHTKHHVDAMRSTQMMTKTQLQNLSNKYDSVYLHPESYQVCVSA
VGSVLQLVDRVMTSDLRNGFAIIRPPGHHAQNNEPNGFCIFNNVAIAARYAQTRHAVSRV
LIVDWDIHHGQGIQYMFEEDPSVLYFSVHRYEQGSFWPHLQESDSQFVGRGRAEGRNINL
AWNKTGMTDADYITAFQQVLLPVAYEFQPQLVLVSAGFDAAIGDPKGEMCVNPSCFHVLT
HMLMSLAEGRLVLALEGGYNLQATAEGAAACVRALLGGACPPLTPPTAPSDSALQSVSET
VSCLYPHWRSLQVLEGGPSADEKDTKKTGTAYSFSSVVTTTGLVYDESMMEHVNMWDRHH
PEQPQRIFKIFSRHQQLGLVHRCQRIPARPATEEELSLCHSVQHVELMKTTAAMKPRDLH
KLAEDFNSIYINNQSFRCAQLAAGGCFNAVGAILSGQVSNGVAIVRPPGHHAERDSPCGF
CFFNTVALTARYAQKISQDPLLRVLILDWDVHHGNGTQHMFEDDDSVLYVSLHRYDNGTF
FPSSEDAGPDRVGVANGAGYNVNVAWSGGRMGDPEYLAAFHRVVMPIATEFNPGLVLVSA
GFDAARGDPLGGYNVTPEGYAHLTHLLTSLAAGRVLVVLEGGYNLTSISDSMAMCTSVLL
GDPPPSLTTPLPPPHHSAVATINEVIRHHAPYWKSLRIHIPESVREAVPSPKPRGKRSSK
GKGRKSDKPPLPPAGPQDSTESLEQLTQGLASLDISQTSANHPPATSTPVGGARPKVRLS
PEKVTCEGEVKEELDDVTPELGQSAESTPPQTVATAVPDSVALGDEMVAEAGAEPETEGA
CGWSKPKMSLEVTCGVEMGGSTLYVVDPLSWCPHLDAVKPLPLSGIDVFLPCQDCGSDAE
NWTCLTCYQVFCGRYVNEHMVTHGVASEHPLVLSFCDLSVWCYVCEAYVHNQILFEAKNA
ANFSKFGEEIPPGS
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggatcagaaccagcaggatctggactgaagtcagtccgaagatctcctcgt
ctgtccccacagggcggcggcgcaggaagtgaggagaggaaaggaggtggaggaggcctg
cagcaggtgaagaggagaggaaggatggagaggagcatagaggaggaggaggaggaggag
ctgagcgacagactgcagacgctggatctgtccaacaggtcagcatcctctggaactggt
ctggtttactcggagatcttcacccgccatcagaaccagtgggagccgagtcatccagag
agtccagacagagtgacgtccatcatggaggagctggagagacaagagctgctgtctcac
tgcgtcagagtggagcctcgagaagctgcagaagaagagctgctgctcgctcacacgaaa
catcatgtggatgcgatgaggtcgactcagatgatgacgaagactcaactacagaatctg
tccaacaagtacgactcagtgtacctgcatcctgagtcctaccaggtgtgtgtgtcggcg
gtgggttcagtcctccagctggttgatcgggtcatgacctctgacctcaggaatggattc
gccatcatcagacctccaggtcatcacgctcagaacaacgagcccaacggtttctgtatt
ttcaacaacgtggcgatcgcagctcgatatgctcaaaccagacatgctgttagcagggtg
ctgatcgtggactgggacatccatcatggccagggcatccagtacatgttcgaggaggat
cccagtgtcctgtacttcagtgtccacaggtacgaacagggatctttctggcctcacctg
caggagtctgacagccagtttgtcggcagaggacgagctgaaggaagaaacatcaacctg
gcttggaacaagaccgggatgaccgatgccgattacatcaccgcttttcaacaagtgctg
ctgccagtggcctacgagtttcagcctcagctggttctggtctctgccggatttgatgct
gcaatcggagatccgaagggggagatgtgtgtgaatccttcatgtttccacgttctgact
cacatgttgatgagtttggctgaaggtcgactcgttctcgctctcgagggaggttacaac
ctgcaggcgacagcagagggcgccgctgcctgcgtccgagctctgctgggcggagcttgt
cctcctctgactccgcccactgctccgtctgacagcgcgctgcagtccgtgtcggagacc
gtctcctgtctgtatcctcactggaggtctctgcaggttctggaaggcggcccatcggcc
gacgagaaggatacgaaaaagaccggcaccgcctactccttctcctccgtcgtcacgaca
acgggcctggtttacgacgagagcatgatggagcacgtgaacatgtgggacaggcatcat
cccgagcagcctcagagaatcttcaagatcttctccagacatcagcagctgggattggtc
catcgttgccaacggataccagctcgcccggcgacggaggaggagctgtcgttgtgtcac
agcgtgcagcacgtggagctgatgaagactacggcggccatgaagcccagagacctgcac
aagctggcggaggacttcaactccatctacatcaacaaccagagcttccgctgcgctcag
ctggccgccggcggctgcttcaacgccgtgggcgcgatcctgagcggacaggtgagtaac
ggcgtggccatcgtccgtcctcccggtcaccacgccgagagagactctccctgcggtttc
tgtttcttcaacacggtggcgctcaccgctcgttacgcccagaaaatctcccaagatccc
ctgctgcgagtcctgatcctggactgggacgttcaccacggcaacgggacgcaacacatg
ttcgaggatgacgacagcgtcctgtacgtgtccctccatcgctacgacaacgggacgttc
ttcccttcctcagaggacgccggccccgacagggtgggcgtggccaacggggcggggtat
aacgtcaacgtggcatggagcggaggacgaatgggcgaccccgagtacctcgccgccttc
caccgcgtcgtcatgccgatcgctaccgagtttaaccccggtctggttctggtgtcggct
gggttcgatgcggcccgcggcgatccgctgggaggctacaacgtcaccccagagggatac
gcccacctcactcacctgctgacatcactggccgcggggcgtgtcctcgtcgtcctggag
ggaggttacaacctgacgtccatctccgactccatggcaatgtgcaccagcgtgttgcta
ggagaccctcctccgtccttgacgacgcccctccctcctcctcaccacagcgccgtggcg
acgatcaacgaggttatccgacaccacgccccctactggaagtcgctgaggatacacatt
ccagagtccgtgcgtgaggccgtcccctccccaaagcctcgtgggaaacgtagttctaaa
ggaaaaggcaggaagtccgacaaaccgccgctgccccctgcaggcccgcaggactccacg
gagagtctggagcagctcactcagggattggccagtttggacatcagtcaaacctcagcc
aatcatcctcctgctacgtccactccggtgggaggagccaggccgaaggtccgcctgagc
ccggagaaggtcacctgcgaaggtgaagtgaaggaggagttggatgacgtcacgcctgag
ctcggccaatcagcagagagtacgccgcctcagactgttgccacggcagtgccagattca
gttgccctcggagacgagatggtagctgaagcaggggcggagccagagacagagggagcg
tgtggttggtcgaagcctaagatgtctctggaggtcacgtgtggagtcgagatgggcgga
tccactctgtacgtggtggaccctctgtcctggtgccctcacctggatgccgttaagccc
ctccccctctcagggatagacgtcttcctgccgtgtcaggactgcggctccgacgctgag
aactggacctgtctcacctgctaccaggtgttctgcggtcgttacgtcaacgaacacatg
gtgactcacggcgtcgcgtcggaacatccgctggttctgagcttctgcgatctctccgtg
tggtgctacgtgtgcgaagcctacgtccacaaccagattctgttcgaagctaaaaacgcc
gccaatttctccaagttcggagaggagatccctccggggagctga
DBGET
integrated database retrieval system
