Bacteroides fragilis NCTC 9343: BF9343_0068
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Entry
BF9343_0068 CDS
T00239
Name
(GenBank) putative tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfs03016
]
BF9343_0068
Enzymes [BR:
bfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BF9343_0068
Transfer RNA biogenesis [BR:
bfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BF9343_0068
Prokaryotic type
BF9343_0068
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAH05847
UniProt:
Q5LJ29
LinkDB
All DBs
Position
67081..67782
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AA seq
233 aa
AA seq
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MNFKEGEVLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTG
KATKRIEEFQYHTKEYVATIQLGATTPSYDLEHEIDATYPTEHITRELVEKTLKTFVGEI
QQIPPAFSACKVDGARAYDLARKGQEVELKPKLLVIDEIELLECNLPEIKIRVVCSKGTY
IRALARDIGEALQSGAHLTGLIRTRVGDVKLEQCLDPAKFAEWIDQQDVEISD
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagaaggagaagtactttattttaataaaccgttgggatggacgtctttt
aaagtcgtggggcacgcccgttaccatatgtgccggcggatgaaagtgaagaaattaaag
gttggacatgcaggtacactcgatcccttggcaacaggggtgatgattgtttgtacaggc
aaggctaccaagagaatagaggagtttcagtatcatacgaaggagtatgtggctaccata
cagttgggcgctactactccgtcttacgatctggaacatgaaatagatgctacataccct
acggagcatattacccgtgagttggtggaaaagacgttgaaaacgtttgttggcgagata
cagcagatacctcccgctttctcggcttgtaaggtagatggtgcacgcgcttacgatttg
gcccgtaaaggccaggaagtggagttgaaaccgaaattgctggtgattgatgagatagag
ttgttggagtgtaatttaccggaaattaaaatacgggtggtttgcagcaaggggacttat
attcgtgcattggcacgtgacatcggagaggctttgcaaagcggggcgcacttgaccggg
ctgatacgtacccgtgtgggagacgttaagttagagcagtgtctggatccggcaaagttc
gcggaatggatagatcagcaagatgttgagatatctgattga
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