Bacteroides fragilis NCTC 9343: BF9343_0659
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Entry
BF9343_0659 CDS
T00239
Name
(GenBank) putative lytic murein transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfs01011
]
BF9343_0659
Enzymes [BR:
bfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BF9343_0659
Peptidoglycan biosynthesis and degradation proteins [BR:
bfs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BF9343_0659
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
CAH06438
UniProt:
Q5LHE2
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All DBs
Position
complement(849859..851178)
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AA seq
439 aa
AA seq
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MKIEQIRMKKLANYCPLILLFLFATPKVNAQSVDVVIRDNGKERQESIELPKSMTYPLDS
LLNDWKAKNYIDLGKDCSTAEINPLFSDSVYIDRLSRMPTVMEMPYNEIVRKFIDMYAGR
LRNQVSFMLSACNFYMPIFEEALDAYNLPLELKYLPIIESALNPSAVSRAGAGGLWQFMI
GTGKMYGLESNSLVDDRRDPIKATWAAARYLKDLYDIYHDWNLVIAAYNCGPGTINKAIR
RSGGETDYWSIYNYLPKETRGYVPAFIAANYVMTYYCDHNICPMETNIPESTDTIQVNKN
LHFQQIADLCNVPMDQIRSLNPQYKKEIIPGESKSYTLRLPQNAVSSFIDRQDTIYAHRA
GELFKNRRTVAIRDDSSASKRRGSSAKAGSGTPTYYKIKNGDTLGAIAAKYGVRVKDLQN
WNGLRGTNISAGKRLKIYK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaacaaataagaatgaagaaattagcaaactattgccccctgattttatta
tttttgtttgccacacccaaggtaaacgcacagagtgtagacgtagtgattcgcgacaac
ggcaaagaacgccaagagagcatcgagcttcccaaaagtatgacttatcctctcgatagc
ctgctcaacgactggaaagccaagaattatatcgacttaggaaaagactgcagtacagcg
gagatcaacccgctgttcagcgactccgtatacatcgaccgcctatcacgcatgccgact
gttatggagatgccatacaacgaaattgtacgtaaatttattgatatgtatgccggacgc
ctgcggaatcaagtctcttttatgttgagtgcctgcaacttctatatgcctatctttgag
gaggccctcgatgcgtataatttaccattggaattgaaatatctgcctattatcgaatcg
gccttgaacccgtcggcagtatcgcgcgccggtgcaggaggcttgtggcagttcatgatc
ggaaccggcaaaatgtacggtctggagtcaaacagcctggtggacgaccgtcgtgacccg
ataaaagcaacctgggcagcagcacgctacctgaaggatctatatgacatttatcatgac
tggaatcttgtgattgcggcttacaactgcggaccgggcactatcaataaagccatccgc
cgctcgggaggagaaaccgactattggagtatttataattatctgcccaaagaaacaaga
ggttacgtaccggcatttatcgccgcgaactatgtaatgacctattactgtgatcacaac
atctgcccgatggaaaccaatattcccgaaagcactgatacgattcaagttaacaaaaac
ctccatttccagcagatcgccgacttatgcaacgtcccaatggaccaaatcagaagtctc
aatccacaatataaaaaagaaatcataccgggcgaaagcaagtcgtacacactgcgcctt
ccacaaaacgcggtcagttcgttcatcgaccgtcaggatacgatttatgcccaccgtgcc
ggcgaactgttcaagaatcggcgtacagtggccatcagggacgacagttcagcctccaag
aggagaggtagctctgccaaagccggcagtggtacacccacttactataaaatcaaaaac
ggggataccctgggagccattgcggcaaaatatggtgtacgcgtaaaagatcttcaaaac
tggaacggattgcggggaactaacatttccgcaggaaaacgtttgaaaatatacaaataa
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