Bacteroides fragilis NCTC 9343: BF9343_0929
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Entry
BF9343_0929 CDS
T00239
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF9343_0929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfs03021
]
BF9343_0929
Transcription machinery [BR:
bfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF9343_0929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_30
Sigma70_r2
HTH_AsnC-type
HTH_24
HTH_10
HTH_38
HTH_11
HTH_23
HTH_28
HTH_40
GerE
HTH_8
DUF7646
HTH_20
PCI
TetR_N
HTH_3
Chlamy_scaf
DDB_G0268712_C
HTH_17
MazG-like
HTH_Mga
HTH_5
Xre-like-HTH
HTH_DeoR
MerR
Raftlin
HTH_Tnp_4
DUF134
Motif
Other DBs
NCBI-ProteinID:
CAH06710
UniProt:
Q5LGM9
LinkDB
All DBs
Position
complement(1211201..1211803)
Genome browser
AA seq
200 aa
AA seq
DB search
MPKTKVYMYNDTSRTVSDETLFFQVQQGNEGAFEALFLRHYPALCAYARLFVEPDDGQEI
VSDVMVWLWENKEMQAFESSLKSYLFKAVKNRCLTLINRNEVKQRIEKMIFDNLQSQYDD
PDFYAIQELTEKIEEALARLPENVREAFELNRFQNLTYNEIAERLGVSPKTIDYRIQQAL
KQLRIDLKEYLPLLLPFLLH
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaaaacgaaggtctacatgtataacgacacctcgcgcacagtaagcgatgaaact
ctgttcttccaggttcagcagggaaacgaaggcgcattcgaagcattgtttctcaggcat
tacccggctctttgtgcctatgcccggctctttgtcgaaccggatgacggccaggagatc
gtatcggacgtcatggtctggctttgggaaaataaagaaatgcaggcattcgagagttcc
ttaaaaagttatttgttcaaggctgttaaaaaccgctgcctgactctcatcaaccggaac
gaagtgaaacaacggatcgaaaaaatgatattcgataatctccaatcgcagtatgatgat
cccgacttctacgctatacaggagttaaccgaaaaaatagaagaagctctggcacgactt
cccgagaatgtacgcgaagcattcgaactcaaccgctttcagaatctgacatacaatgaa
atagccgaacgactgggagtgtctcccaaaacaatcgattaccggattcaacaggcctta
aaacagttgcgcatcgacctgaaggagtatctccccttattacttcctttcctcctgcat
tga
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