Bacteroides fragilis NCTC 9343: BF9343_1132
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Entry
BF9343_1132 CDS
T00239
Symbol
nfo
Name
(GenBank) putative endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BF9343_1132 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_1132 (nfo)
Enzymes [BR:
bfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BF9343_1132 (nfo)
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BF9343_1132 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF7645
Motif
Other DBs
NCBI-ProteinID:
CAH06913
UniProt:
Q5LG28
LinkDB
All DBs
Position
complement(1449631..1450467)
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AA seq
278 aa
AA seq
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MKYIGAHVSASGGVEFAPVNAHEIGANAFALFTKNQRQWVSKPLTEDSIRLFKENCEKFG
FAPEYILPHDSYLINLGHPEEEGLTKSRAAFLDEMQRCEQLGLKLLNFHPGSHLNKISVE
ECLDRIAESINLALEKTKGVTAVIENTAGQGSNLGNEFWQLKYIIDRVEDKSRVGVCLDT
CHTFTAGYDFLNDYDDVFGEFGEVVGFEYLRGMHLNDSKKELGSRVDRHDSIGKGLIGFA
FFEKLMKDPRFDNMPLILETIDETLWPEEIAWLREQTQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatatcggagcacatgtcagtgcatcgggaggagtagagtttgctcctgttaat
gcacatgagatcggggccaatgcgttcgccctcttcacaaaaaatcaacgccagtgggtc
agtaagcctctaactgaagatagtattcgtctattcaaagaaaattgtgagaagttcggt
tttgcccccgaatacattctcccacatgacagttatctgatcaatctgggacatcctgaa
gaagaaggattaactaaaagtagggctgctttccttgacgaaatgcaacgctgcgaacaa
ctgggattaaaattactgaacttccatccgggaagccatctcaacaagatatcggtagag
gaatgtctggaccgaattgcagaaagtatcaatctggctttggaaaagaccaaaggagta
accgctgttattgaaaacacggcaggacagggaagtaacctgggaaatgaattctggcag
ttgaaatacatcatcgaccgcgtggaagataaaagccgtgtaggagtgtgcctggacacc
tgccacacctttacagccggttatgactttctgaatgattatgatgacgtattcggagaa
ttcggtgaagtggtcggatttgaatatctgcggggaatgcatctcaacgattcaaaaaaa
gaattgggaagtcgtgtagaccgtcacgacagcatcggtaagggattaatcggtttcgct
ttctttgagaagctaatgaaagatccccgtttcgacaacatgccgttgattctggagact
atcgacgaaacactgtggcccgaagaaatagcctggctgagagaacaaactcaataa
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