Bacteroides fragilis NCTC 9343: BF9343_1138
Help
Entry
BF9343_1138 CDS
T00239
Name
(GenBank) putative ECF-type RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF9343_1138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfs03021
]
BF9343_1138
Transcription machinery [BR:
bfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF9343_1138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_10
HTH_38
HTH_23
HTH_40
HTH_11
PRESAN
PCI
HTH_24
HTH_Tnp_ISL3
CFAP99_CC
HTH_30
HTH_3
Fe_dep_repress
HTH_AsnC-type
EntA_Immun
wHTH_Par
Motif
Other DBs
NCBI-ProteinID:
CAH06919
UniProt:
Q5LG22
LinkDB
All DBs
Position
1459337..1459882
Genome browser
AA seq
181 aa
AA seq
DB search
MKKDGFSEIYDIYFPKLLRFTRTYLISEDESENIVQEIFIYLWEHRDIIETLQNLNAYLF
TLAKNRCIDYFRKEMVREVRKGSLSEIENRELQLKLYSLEAFDNDRLSDADIEEILNNAI
NRLPERCREIFIMSRLQNLRYKEIAEKLNVSPNTVENQIVIALRKLKEDLKDYFPLFIFI
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacggtttctctgaaatttatgatatttattttccgaagttgctgcgtttt
accaggacgtatctgatttcggaagatgaatcggagaatattgtccaagaaatctttatt
tatttgtgggaacacagagatatcattgagactcttcagaatctgaatgcctatctgttt
acgttagcaaaaaatcgttgtatagactattttcgtaaggagatggtccgtgaagttcgt
aaaggttcgctttcggaaatagagaacagagaacttcaattgaaactgtattcattggaa
gcatttgataatgatcgtctttcggatgccgatattgaagaaatactgaataatgccatc
aatcgtttaccggagaggtgccgtgaaatatttattatgagccgtttgcaaaatctccgt
tataaagagatagctgaaaagttgaatgtttctccaaatacggttgaaaatcagattgtc
atagcgttgcgtaaattaaaagaagacttgaaagactactttcccctctttattttcatt
atctga
DBGET
integrated database retrieval system
