Bacteroides fragilis NCTC 9343: BF9343_1157
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Entry
BF9343_1157 CDS
T00239
Name
(GenBank) putative DNA mismatch repair MutS protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BF9343_1157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_1157
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BF9343_1157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
TetR_C_38
DUF948
DehI
Motif
Other DBs
NCBI-ProteinID:
CAH06938
UniProt:
Q5LG03
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Position
complement(1480010..1482508)
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AA seq
832 aa
AA seq
DB search
MIYPQNFEQKIGFDQIRQLLKDKCLSTLGEERVNEMNFSDHFEEVDELLNQVAEFVRIIQ
EEDNFPDQFFFDVRPSLKRIRIEGMYMDEQELFDLRRSLETIRDIVRFLQRNDEEESDCP
YPSLKKLAGDITVFPQLITKIDGILNKYGKIKDNASTELSRIRRELANTMGSISRSLNSI
LRNAQSEGYVDKDVAPTMRDGRLVIPVAPGLKRKIKGIVHDESASGKTVFIEPAEVVEAN
NRIRELEGDERREIIRILTEFSNTLRPSIPEILQSYEFLAEIDFIRAKSHFAIQTNSIKP
SLENEQLLDWTMAVHPLLQLSLAKHGKKVVPLDIELNLKRRILIISGPNAGGKSVCLKTV
GLLQYMLQCGMLVPMHERSHVGLFGSIFIDIGDEQSIEDDLSTYSSHLTNMKIMMKNCNE
RSLILIDEFGGGTEPQIGGAIAEAVLKRFNIKGTFGVITTHYQNLKHFAEDHEGVVNGAM
LYDRHLMQALFQLQIGNPGSSFAVEIARKIGLPEDVITDASEIVGSEYINADKYLQDIVR
DKRYWEGKRQTIRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIE
NTIRTIKEAQAEKEKTRLVRQELADFRESIDNLTSKEQEDKIARKMEKLKEKQNRKKEKK
QNGTKEQPTVQQTPKATPITEGCPVRIKGQSSVGEVLEINGKNAVVAFGSIKTTVKTERL
ERSNAIPQKQESAKSSFVSNQTQDSMYEKKLNFKQDIDVRGMRGDEALQAVTYFVDDAIL
VGMSRVRILHGTGTGILRTLIRQYLQTIPGVRHFADEHIQLGGAGITVVDLA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatatatccccagaattttgagcagaaaataggattcgaccaaatcagacaattatta
aaagacaaatgtctcagcacattaggagaagagagagtgaatgaaatgaatttttccgat
cactttgaagaagttgatgaactgctgaatcaggttgcagagtttgttcgcatcatacaa
gaggaagataactttcccgaccaattttttttcgatgtccgtccctctttgaaacgaatc
cggatagaaggaatgtacatggacgaacaagaattgtttgatctacgacgttcgttggag
accatccgggacatcgtccgtttcctgcagcgcaatgatgaagaagaatcggattgtccc
taccccagcctgaaaaaactggccggtgacataactgtctttccacaacttatcaccaag
attgatggcattttaaataaatatggcaaaatcaaggataatgcttcgaccgaactgtca
cgcatccgacgggaactggctaacacgatgggaagtatctcacgttcgcttaacagcata
ctccgaaacgcacaatccgaaggctatgtggacaaagacgtggcaccaaccatgcgcgac
ggtcgattggttattccggtggctccgggattaaaacgtaaaatcaaaggaatcgtccac
gatgaatcggccagcggaaaaactgtatttatcgaaccagcggaagtagtggaagccaac
aaccgtatccgtgaactggaaggggatgaacgccgggagatcatccgtatcctgactgag
ttctctaacaccctgcgtccttctatcccggaaatactgcaatcgtatgaatttcttgcc
gagatagacttcattcgtgccaaaagtcacttcgccatccaaacaaacagtatcaaaccc
agcctggagaacgagcaattattggactggacaatggccgtccacccactattacaactt
tctcttgccaaacatggaaagaaagtagtgccattggacatagaactgaacctcaaacgg
cgtatccttattatatccggtcccaacgcaggaggtaaatccgtatgtctgaaaacagtc
gggttactacaatatatgctgcaatgcggcatgctcgtacccatgcacgaacgaagtcat
gtaggcctgtttggcagtatcttcatcgacatcggtgatgaacaatccattgaagacgat
ttgagtacctattcttcacacttgaccaatatgaaaatcatgatgaagaactgcaacgaa
cgaagtctgattttaattgacgaattcggtggaggtacagaaccccagatcggcggagct
attgccgaagctgtactgaaacgattcaacataaagggtactttcggtgttataactaca
cactaccagaatctaaaacattttgcagaggatcacgaaggtgtagtaaacggtgccatg
ctatatgaccgtcatctgatgcaggcacttttccaacttcagatcggtaatccgggtagt
tcattcgctgtagaaatcgctcgtaaaatcggattaccggaggatgtgatcacagatgct
tctgagattgtgggaagtgaatatatcaatgccgacaaatatttgcaggatatcgtacgt
gacaaacgttactgggaaggaaagcgtcagactatccgccagcgcgaaaagcatatggaa
gaaaccattgcccgctatcaggctgagatggaagaattacaaaagtcgagaaaagagatc
atccgtcaggcaaaagaggaggcggagcggttgttgcaagaatcaaatgcacgtatcgag
aataccatccgtaccataaaagaggcacaggctgaaaaagaaaaaacacgtctggtacgc
caggaactggcggacttccgtgaatcgatagacaacctgacttccaaggaacaggaagat
aagatagcccgaaagatggagaagctgaaagagaagcaaaaccgcaagaaggagaaaaag
caaaacggcaccaaagaacagccgacagttcagcaaactcccaaagcgactcccatcacc
gaagggtgtccggtacgtatcaaaggacaaagttcggtcggagaagtacttgaaatcaac
gggaagaatgccgtggtagccttcggcagcatcaaaacaactgtaaagacggagcggctg
gaacgcagcaacgcaatcccccaaaaacaagagtctgccaaaagttcttttgtcagcaac
cagactcaggacagcatgtacgaaaaaaagctgaacttcaagcaagatatcgatgtacgg
ggaatgcgaggagacgaagctctacaagctgtaacctactttgtagacgacgccatcctg
gtcggtatgagccgggtacgcatcctacatgggaccggtacgggtatcctgcgtaccctt
atccgccaatatttgcaaaccataccgggagtccgccattttgccgacgaacatatccaa
ttgggaggtgcaggtatcacggtagtcgatttggcataa
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