Bacteroides fragilis NCTC 9343: BF9343_1192
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Entry
BF9343_1192 CDS
T00239
Symbol
exc
Name
(GenBank) putative transposon excision protein
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfs03032
]
BF9343_1192 (exc)
Enzymes [BR:
bfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BF9343_1192 (exc)
DNA replication proteins [BR:
bfs03032
]
Prokaryotic type
DNA Topoisomerases
BF9343_1192 (exc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF3945
Sec7-like_HDS
Motif
Other DBs
NCBI-ProteinID:
CAH06973
UniProt:
Q5LFX0
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All DBs
Position
1512040..1514121
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AA seq
693 aa
AA seq
DB search
MIAVIGEKPSVARDIARILGASEKQDGYLSGNGYLVTWAFGHLVGLAMPEAYGIQSFRRE
SLPIIPDSFQLTPRQVKAEKGYKADPGALKQLKVIKEVFDQSDKIIVATDAGREGELIFR
YIYQYIGCNKPFVRLWISSLTDKAIREGLQNLKAGSLYDNLFRSAQARSEADYLIGINAT
QALSVAAGQGIFSLGRVQSPTLAMICTRFLENKNFVPQKYWQLKLQSAKDNIAFTALSAD
KYDMQQAAIDTLQRIKEAKTVQVKTVERKEVNQEPPLLYDLTTLQKEANAKLNFSADKTL
SIAQKLYEGKLISYPRTGSRYISQDVFEEIPERLVNLEQYARFAGYAAGMKGKALNSRSV
NDGRVTDHHALIVTENLPGKMETDEQAIYELIAGRMLEAFSEKCVKDVTSVTLECAGSLF
TVKGSVIKSAGWRAVFAEKEDGEDNATLPVMQDGDTLPLSGIELLEKQTKPKPLHTESSL
LSSMETAGKELENADLKASMKDTGIGTPATRAAIIETLFFRQYIVREKKNLVPTEKGLAV
YNIIRDKKIADVEMTGMWENTLAKIESGEMNPDTFRKGIEVYARQITAELLGVQLSFASG
SGCICPKCKTGRILFDPKVAKCSNVDCSVTIFRNKSDKQLTDKQITELVTTGKTGLIKGF
KSKNGKVFDASLTFDEQFNVTFVFPEKKGKSKK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagtaatcggagaaaaaccaagtgtggcaagggacattgcccgcattttagga
gcgagtgaaaaacaggatggctacctttcaggtaacgggtatctcgttacctgggcgttc
ggccatcttgtaggtttggcaatgccggaagcatacggcatacagagtttccgtcgggaa
agtctgcctatcattccggatagttttcaacttaccccccgacaagtaaaagcggaaaaa
gggtacaaggcagaccccggcgcattgaaacagctaaaggtaatcaaagaggtattcgac
cagtcggacaagattatagtcgccaccgatgcaggaagagagggagaacttatattcagg
tacatctaccagtatatcggatgcaacaagccctttgtccgtttatggataagcagcctt
acggacaaggcaatccgtgagggactgcaaaacctgaaagccggtagtctgtatgataac
ctgttccgttcggcacaggcacgcagcgaagcggattatttgattggaataaacgcaaca
caggctttaagcgtggcagccggacaaggaatattctctttgggacgggtacagtcacct
acgttggcaatgatatgcactcgctttttggagaacaagaactttgtcccgcaaaagtat
tggcaactgaaattacagtcggcaaaggataatatagcttttacggcactatccgcagat
aaatacgatatgcagcaagccgccatcgacacgttgcaaaggataaaggaagcgaaaacg
gttcaggtgaaaaccgtagagcgtaaggaagtgaaccaagaaccgcctttgctctatgat
ttaaccacgctgcaaaaagaagcgaatgccaaactgaatttttccgcagacaaaacccta
tccattgcacaaaagttatacgagggtaaactaatcagctacccccgaaccggaagccgt
tatatatcgcaggatgtgttcgaggaaatcccggaacgtcttgttaatttggaacagtac
gctcgttttgccgggtatgctgccgggatgaaaggcaaagccttaaattcccgttctgtg
aacgatggcagggtaacagaccaccacgctttgatagtaacggaaaatctgcccggcaag
atggaaacggacgaacaggcaatctatgaactgatagccggacggatgttggaagccttt
tctgaaaaatgcgtcaaagacgttaccagtgtaacgctggaatgtgcagggtcgcttttc
acggtcaaagggtctgtaatcaaatccgccggatggcgtgccgtattcgccgagaaagaa
gacggagaggataacgccactttgcccgtcatgcaggacggtgacactctgccactttcc
ggcattgaactactggagaaacagaccaagcccaagccgttacacacggaaagcagcctg
ctttcttcaatggaaacagcgggtaaggaactggaaaacgccgacctgaaagccagcatg
aaagatacgggtatcggtacgcccgctacgagggcagccatcatcgaaacgctgtttttc
cgccagtatatcgtccgggagaaaaagaaccttgtcccgaccgagaaagggcttgccgtt
tacaacattatccgggataagaagatagcagacgttgaaatgacgggaatgtgggaaaac
acgcttgccaaaatagaaagcggagaaatgaaccccgacacgttccgcaaaggcatcgaa
gtgtatgcacggcaaattacggctgaacttttgggtgttcagctttctttcgcttcgggt
agtggttgcatttgccccaaatgcaagaccggacgcatccttttcgatccgaaagtcgcc
aaatgttccaatgtggattgttccgttaccatctttcgcaataagagcgacaagcagcta
acagacaagcagattaccgaactggtgactaccgggaaaaccgggctaatcaaaggcttt
aaaagcaagaacggcaaagtctttgacgcttcacttacctttgacgagcagtttaatgtt
actttcgtgtttcctgaaaagaaaggtaagtcgaagaagtaa
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