Bacteroides fragilis NCTC 9343: BF9343_1492
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Entry
BF9343_1492 CDS
T00239
Symbol
hup1
Name
(GenBank) putative histone-like DNA-binding protein HU1
KO
K03530
DNA-binding protein HU-beta
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfs03032
]
BF9343_1492 (hup1)
03036 Chromosome and associated proteins [BR:
bfs03036
]
BF9343_1492 (hup1)
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_1492 (hup1)
DNA replication proteins [BR:
bfs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BF9343_1492 (hup1)
Chromosome and associated proteins [BR:
bfs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BF9343_1492 (hup1)
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BF9343_1492 (hup1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
PqqD
Motif
Other DBs
NCBI-ProteinID:
CAH07273
UniProt:
Q5LF25
LinkDB
All DBs
Position
complement(1824339..1824614)
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AA seq
91 aa
AA seq
DB search
MTKADIVNEIAKNTGVDKVTVLTTVEAFMDAVKDSLSKDENVYLRGFGSFVVKKRAQKTA
RNISKNTTIIIPEHNIPAFKPAKTFTLSVKK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgtaaacgaaattgcaaagaacaccggtgttgacaaagtaaca
gtacttacaacagttgaggcatttatggatgcagtgaaagattctttgtctaaggacgag
aatgtttacctccgtggatttggtagcttcgtcgtaaagaaaagagctcaaaaaaccgct
cgtaatatttctaagaatacgactatcatcattccggaacacaacattccggcgttcaaa
ccagctaagacattcaccctttcggtaaagaaataa
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