Bacteroides fragilis NCTC 9343: BF9343_2105
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Entry
BF9343_2105 CDS
T00239
Name
(GenBank) putative helicase
Organism
bfs
Bacteroides fragilis NCTC 9343
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Cas_Cas4
PDDEXK_1
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
CAH07886
UniProt:
Q5LDC4
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All DBs
Position
complement(2549633..2552806)
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AA seq
1057 aa
AA seq
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MSELIVYKASAGSGKTFTLAVEYIKLLIRNPRAYRQILAVTFTNKATAEMKERILSQLYG
IQIGDPDSDAYLKRIIAETGHSEDEIRTTAGIALGYMLHDYSRFRVETIDSFFQSVMRNL
ARELELSPNLNIELNNVEVLSDAVDSMIEKLGPNSPVLVWLLDYIDERIADDKRWNVSDE
IKSFGRNIFDEGYIEKGDGLRRRLRDPNVIHNYRKTLKEMETAALEQMKEFAQQFENVLS
SQSLKPTDLKNGAKGIGSYFNKLKNGILGDEIVNATVIKCLDDETNWAAKTSKQYTDIIL
LASSILMPLLQNAEQYRSRNNRIVNSCRLSTQHLNKVRLLTNIDEEVRQLNRENNRFLLS
DTNALLHQLVKDGDSSFVFEKIGTNIRNVMIDEFQDTSRMQWDNFKLLLLEGLSQGADSL
IVGDVKQSIYRWRNGDWGILNGLNKQLGYFSIRTETLKTNRRSETNIIRFNNSIFSAAVD
YLNEMYNKQLGSICEPLINAYADVEQESPRNKQQGYVKVEFLEPDEEHDYTEQTLISLGM
EVEHLLQSGVKLNDIAILVRKNKSIPRIADYFDKQLNYKIVSDEAFRLDASLAICMMLDA
LRYLSDPENRIVKAQLATNYQLQILHSEYDLNSLLLHKAEELFPPAFLERMAELRLMPLY
ELLEELFSLFELHRIEQQDAYLFAFFDAVTDYLQSHSSDPDSFIRYWNETLSGKTIPSGE
VEGIRIFSIHKSKGLEFHTVLLPFCDWKLENETNNQLVWCVPQEAPFNELDIVPVNYSSA
MAESVYRTDYLHERLQLWVDNLNLLYVAFTRAGKNLIIWSRKGQRNTMAELLTGALPQAA
NKLDQEWDEEQVYELGDLCPSENEKKIDSGNKLTRKPEKLPVNMESMHPDIEFRQSNRSA
DFIKGLSEEESDDRFINHGQLLHTLFSAIETKDDIEPAIQRLIFEGIIGSKEAEKQIRSL
TVKAFSLPEVQEWYSGEWRLFNECAIIYKDKGVLQTRRPDRVMMKNEQVVVVDFKFGKAN
KKYNKQVKGYMQLLSRMGYKNITGYLWYVEEEIIEKV
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcattgtctataaagcctccgccgggtccggaaaaaccttcaccctggct
gttgaatatatcaagttactaatccggaatccgcgtgcctatcgccagattttagcagta
acctttactaataaagctactgctgaaatgaaggagcgtattcttagtcaattatatgga
atacagataggcgatccggattcggatgcctatctaaaacgcataattgccgagacaggg
cattcagaagacgagatacgaacaacggcaggcatagctttgggttatatgcttcatgac
tacagtcggttccgcgtcgaaaccattgattccttttttcaatcggtcatgcgtaatctg
gctcgtgaacttgaattgagtcccaatctgaatatcgaactgaacaacgtagaagtattg
agcgatgctgtggacagtatgattgaaaagttgggacccaattcacctgtactggtatgg
ctgctcgattatatagatgaacgtatcgctgacgataaacgctggaatgtttcggatgag
atcaaaagtttcggacggaatatttttgatgaaggatacatcgagaaaggtgatggtctc
cgccgacgcctccgtgacccgaatgtaatccataattatcgtaagacattaaaagagatg
gaaacagccgctcttgaacagatgaaagagttcgctcaacagtttgaaaatgtactttcc
agtcaatcactgaaaccaactgatttaaagaacggagccaaaggaataggaagctatttc
aataaactaaaaaacggtatactcggagacgagatagtcaatgctactgtaatcaaatgc
ctcgatgacgagactaattgggctgcaaaaacatcaaaacaatatacggatattatattg
ttggcttcttccatcttaatgccacttctacaaaatgccgaacaatatcgctcacgcaac
aatcgaatagtgaacagctgccgactgtcgacacagcacctgaacaaagtccggctttta
accaatattgatgaagaagtacgtcaactgaatcgtgaaaacaatcgtttcctcctttcg
gataccaacgctttgctccaccaattagtgaaagacggtgactcctcttttgttttcgaa
aaaatcggaactaacatccgcaatgtgatgatagacgaatttcaagacaccagtcgaatg
caatgggataattttaaactcctgctacttgaaggattgtctcaaggagccgacagcttg
attgtaggtgatgtcaagcaatctatttatcgttggcgaaacggcgattggggaatcctt
aacggattaaacaagcaacttggatatttttctatccgtacagaaacgttaaaaaccaac
cgtcgaagtgaaaccaatatcatacgattcaacaatagtatattctccgcggctgtggac
tatctcaacgaaatgtataataagcagttgggaagtatttgtgagcctctgatcaatgca
tatgccgacgtggaacaggaatccccccgaaacaaacaacaaggatacgttaaggtagag
tttctcgaaccggacgaagaacacgattatacagaacaaacccttatcagcctgggaatg
gaagtagaacatctgttacaatccggcgttaaactgaacgatatagctattctcgtaaga
aagaataaaagtattccgcgtattgccgattacttcgataaacaactaaattataagatt
gtgtctgacgaagccttccgtctggatgcctcgctcgccatctgtatgatgttggatgcc
ttgcgctatctttccgatccggagaatcggatcgtgaaagcacagttggccactaattac
caattacaaatacttcattcggagtatgatctcaattcgctgctcctccataaagccgaa
gaattatttccaccggcttttctggaacgaatggcagaactacggttgatgcctctgtat
gaactgttagaggaacttttcagtttatttgaactgcaccgtattgaacaacaggacgct
tacctgtttgctttctttgatgcagtaaccgattatctgcaaagccactcttctgatccg
gacagctttatacgatattggaacgagacgttatccgggaaaacaattccgagcggcgaa
gtggagggtatacgtatcttttcaatacataaatccaaaggactggaatttcatacggta
ctcctacccttctgcgactggaaactggaaaatgaaacaaacaaccaactcgtctggtgc
gtacctcaagaagcccctttcaacgagttggatattgtgccggtaaattactcttccgcc
atggcagaatcagtataccgcacagattatttacacgaacgcctgcaactatgggtagac
aatctgaatctgctttacgtagcatttacacgtgccggaaaaaatttgattatctggagt
cggaaaggacaaagaaatacaatggccgaattgctaaccggagcactaccacaggctgcc
aacaaattagatcaggaatgggatgaagaacaggtatatgaattaggtgacctttgccca
tccgaaaatgagaaaaaaatcgattcaggtaacaagctgactcgcaaaccggaaaaactt
ccggtcaatatggaatctatgcatccggatatagaattccgacagtccaaccgatctgct
gattttatcaaggggctttctgaagaagaatccgatgaccgcttcataaatcacggacaa
ttgttgcatactttattttctgccattgagaccaaggatgacatagaaccggccattcag
cgcttgatattcgagggaatcattggcagcaaagaagcggaaaaacaaatacgttctctg
accgtaaaggccttctccctgcctgaagtacaagagtggtactccggtgaatggagattg
ttcaacgagtgcgcaatcatttacaaagacaaaggtgtattacaaacccgtcgccctgat
cgtgtaatgatgaaaaacgagcaagtagttgtggtagacttcaaatttggtaaagcaaac
aaaaaatacaacaaacaggtaaaaggatacatgcagctcctctcccgaatgggatacaaa
aacatcacaggttatctgtggtatgtagaagaagaaataatcgaaaaagtatga
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