Bacteroides fragilis NCTC 9343: BF9343_2411
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Entry
BF9343_2411 CDS
T00239
Symbol
clpB
Name
(GenBank) negative regulator of genetic competence
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bfs03110
]
BF9343_2411 (clpB)
Chaperones and folding catalysts [BR:
bfs03110
]
Heat shock proteins
HSP100
BF9343_2411 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
Clp_N
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
IstB_IS21
UVR
AAA_3
AAA_14
TniB
bpMoxR
AAA_18
AAA_7
ATPase_2
RNA_helicase
AAA_24
RsgA_GTPase
ResIII
Torsin
DUF815
Tub_N
AAA_25
AAA_33
DUF7432
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAH08192
UniProt:
Q5LCH3
LinkDB
All DBs
Position
complement(2896396..2898930)
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AA seq
844 aa
AA seq
DB search
MNNQFSQKVSDIIVYSKEEANRLKSSYIGPEHLLLGMLRDGEGKAIEILSKLKTNLTDIK
KQIEAILKEHADDMLLPDADVPLSNGAAKILKLCILEARVMKSQVADTEHVLLAILKDKD
NLAATVLEANHVNYQQVFEQLSLQPDISAGMGFTEDDDDEEEMNQSRSSHGSGERQQQAQ
TASRKPTNDTPVLDNFGTDMTKAAEEGRLDPVVGREREIERLAQILSRRKKNNPILIGEP
GVGKSAIVEGLALRIIQKKVSRILFDKRVVALDMTAVVAGTKYRGQFEERIRSILNELQK
NPNVILFIDEIHTIVGAGSAAGSMDAANMLKPALARGEIQCIGATTLDEYRKNIEKDGAL
ERRFQKVMVEPTTADETLQILRNIKDKYEDHHNVNYTDAALEACVKLTDRYITDRNFPDK
AIDALDEAGSRVHLTNVSVPKEIEDQEKLIEEAKNNKNEAVKSQNFELAASFRDKEKELA
VQLDVMKKDWEERLKDNRETVDEEEIANVVSMMSGIPVQRMAQAEGIKLAGMKEDLQSKV
IAQDDAIKKLVKAILRSRVGLKDPNKPIGTFMFLGPTGVGKTHLAKELAKYMFGSSDALI
RIDMSEFMEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIVLLDEIEKAHPDVFNLL
LQVMDEGRLTDSYGRMVDFKNTVIIMTSNIGTRQLKEFGRGVGFATQSRLDDKEFSRSVI
QKALNKSFAPEFINRVDEIITFDQLSLEAITKIIDIELKGLYNRIESIGYKLVIEDKAKQ
FVASKGYDVQYGARPLKRAIQTYLEDGLSELIISADLNEGDTITVSLNEEKGELEMKNEA
KTAE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaattctcacaaaaagtttccgatattatcgtatatagcaaagaagaggca
aatcgcctgaaaagtagctatatagggcctgagcatttattgcttggtatgcttcgcgat
ggtgagggaaaagcaatcgagatattgtctaaactcaaaacaaacctgaccgacataaag
aagcagattgaggccatactgaaagagcatgcagacgacatgctgttgcctgatgccgat
gttccattgtcaaatggagctgcaaagatattgaaactatgtattttagaagcacgagtg
atgaaaagtcaagttgcagatacggaacatgtactgctggccatccttaaagataaggat
aatctggcagcaacggttcttgaagcgaatcatgtgaattaccagcaggtattcgaacaa
ttgtccttacagccggatatcagtgccggcatgggatttacagaagatgatgatgacgaa
gaagagatgaatcaatcccgttcgtcccatggatccggtgaacgtcagcaacaggcgcag
actgcctccaggaagccgactaatgatactccggtgcttgataattttggtactgatatg
actaaggccgccgaggaaggccgtcttgaccctgtggtgggacgtgagcgggaaatcgag
cgcctggcacagatattaagtcgccgtaagaagaataaccccattttgatcggtgaaccg
ggagtcggaaaatcggccatagtggaaggtctggcacttcgtattatacagaaaaaggtg
tcccgtattctgtttgataagcgtgtggttgcactcgatatgactgcggttgttgccggt
accaagtaccgcggacaatttgaggaacgcattcgttccatcttgaacgaattgcagaag
aatccgaatgtgattctgttcattgacgagatacataccattgtaggtgccggatcggca
gccggatcaatggatgctgccaacatgttgaaaccggcattggcacgtggagagattcag
tgtatcggtgccactacccttgacgaatatcggaagaatatcgaaaaagacggggcgttg
gagcgtcgtttccagaaggtaatggtagagcctactacagctgacgaaacgttgcagatt
cttcgtaatattaaggataaatatgaagatcatcacaacgtaaattatacggatgcggca
ttggaagcttgtgtcaagttgacagaccgttatataaccgaccgtaacttcccggataaa
gctattgatgcactcgatgaagccggttcgcgtgtacatcttaccaatgtgagtgtaccc
aaggaaatagaagatcaggagaagttgatcgaagaagctaaaaataacaagaacgaggct
gtcaaatcacagaatttcgaacttgctgccagttttcgcgataaggaaaaagaacttgct
gtccagttggatgtgatgaagaaagactgggaggaacgtttgaaggataatcgtgagacg
gtggatgaggaagaaatcgcaaatgtcgtatcaatgatgtccggcattccggtacagcgt
atggcacaggcggaaggcatcaagttggcaggcatgaaagaagacctgcaatcgaaggtg
atagctcaggacgatgctatcaaaaagctggtcaaggccattctgcgcagccgtgtcgga
ctgaaagatccgaataaaccgattggtacatttatgttcctaggccctaccggtgttggt
aaaactcatctggccaaggaattggctaaatatatgtttggctcttcggatgcattgatc
cgtatcgatatgagtgagtttatggagaaattcacagtctcacgcttggttggagcgcct
ccgggatacgtaggatacgaggaaggcggacaattgacagagaaagtacgccgtaaaccc
tattctatcgtattgcttgacgaaatagaaaaggcgcatcccgatgtgttcaatctgctt
ctccaggtgatggacgaaggtcggctgactgacagttatggcagaatggttgacttcaag
aatactgttattatcatgacatcgaatatcggaacccgccagttgaaagagtttgggcgt
ggagtcggttttgccactcaaagccgtcttgacgataaagaattctctcgcagcgtgatt
cagaaggctctgaataaatcgtttgcacccgaatttataaatcgtgttgacgaaatcatc
acctttgaccagttgtcattagaagctataacgaagattatcgatattgagttgaaagga
ctgtataacagaatcgaatctatcggctataaactggtcattgaagacaaggctaaacag
tttgtcgcttcaaaaggctatgatgtccagtacggtgcacgtccgctgaagcgtgccatc
cagacctatctggaagacggcttatcggaacttatcatttcggctgatctgaatgaagga
gatacgatcactgtctctttaaatgaagaaaagggtgagttggaaatgaagaatgaagcc
aaaacggctgaataa
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