Bacteroides fragilis NCTC 9343: BF9343_2553
Help
Entry
BF9343_2553 CDS
T00239
Symbol
uvrA1
Name
(GenBank) UvrABC SOS-repair system protein excinuclease A
KO
K03701
excinuclease ABC subunit A
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF9343_2553 (uvrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_2553 (uvrA1)
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF9343_2553 (uvrA1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BF9343_2553 (uvrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
nSTAND1
AAA_22
DnaJ_CXXCXGXG
ATPase_2
AAA_14
AAA_18
Viral_helicase1
AAA_33
T2SSE
cobW
PRK
AAA_23
AAA_24
Glutenin_hmw
Motif
Other DBs
NCBI-ProteinID:
CAH08334
UniProt:
Q5LC32
LinkDB
All DBs
Position
complement(3064516..3067344)
Genome browser
AA seq
942 aa
AA seq
DB search
MQETEYINVYGARVHNLKDIDAEIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRRYIETF
SAYARNFLGNLERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLYARAGI
AYSYLSGEKMVKYTEEQILELILKDYKGKKIYMLAPLVRSRKGHYKELFEQIRKKGYLYV
RIDGEVREITHGLKLDRYKNHDIEVVVDKLIVEDKDDKRLKQSVATAMRQGDGLLMILDA
QTESIRHYSKRLMCPVTGLSYREPAPHNFSFNSPQGACPRCKGLGVVSQIDVDKVIPNKE
MSIYEGAIAPLGKYKNAMIFWQIGALLEKYDASLKTPVKDLPNDAIDEILYGSDERIKIK
SSLIGTSSDYFVTYEGVVKYIQMLQEKDASATAQKWAEQFAKTTVCPECKGAKLNKEALH
FRIHDKNINELSNMDINELYDWLMKVDKFLTDKQKTIAAEILKEIRTRLKFLLDVGLDYL
SLNRSSVSLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNLRLINSLKELRDMG
NSVIVVEHDKDMMLAADYVIDMGPKAGRLGGEVVFAGTPEEMLKTSTLTSQYLNGQTAIE
VPSKRRPGNGKSLWLRGAKGNNLKNVDVEFPLGKLICVTGVSGSGKSTLINETLQPILSQ
KFYRSLQDPLEYDSIEGLENIDKVVNVDQSPLGRTPRSNPATYTGVFSDIRSLFVGLPEA
KIRGYKPGRFSFNVSGGRCEACSGNGYKTIEMNFLPDVYVPCEVCHGKRYNRETLEVRFK
GKSIADVLDMTINRAVEFFENVPQILNKIKTIQDVGLGYIKLGQSSTTLSGGESQRVKLA
TELSKRDTGKTLYILDEPTTGLHFEDIRVLMGVLNKLVDKGNTVIVIEHNLDVIKMADYI
IDMGPEGGKGGGELLSFGTPEEVAKSNKGYTPKFLREELKIN
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaacagaatatataaatgtgtatggtgcgcgcgtacacaatctgaaagacatt
gatgcggaaataccacgtaatagcctgactgtaattaccggacttagtggaagcgggaag
tcatctcttgctttcgatacgatatttgcagaaggacagcgccgctatattgaaactttt
tcggcttatgcccgcaactttttgggcaatctggagcgtccggatgtagataagataaca
ggattgagtccggttatttccattgaacagaaaactacgaacaaaaatccccgttctacg
gtcggaaccactacggagatttacgactatctacgtttgctttatgcccgtgccggaata
gcttattcttatctttcgggagaaaagatggtgaaatacaccgaagaacagatattggaa
cttattctgaaagattataaagggaagaaaatctatatgctggcccctctggtgcgttcg
cgtaagggacattataaagaactctttgaacaaatccggaaaaaaggatacctgtatgtc
cgtatcgacggggaggttcgtgagattacacatggtctgaaactggatcgttataagaat
catgatattgaagtagtcgttgacaaactgatcgtagaagataaggatgataaacggttg
aaacagagtgttgccaccgccatgcgtcagggagacggattgctgatgattctcgatgca
cagacagagagtatccgacactatagcaaacgcttgatgtgtcctgttacgggattgtcg
taccgggagccggctccgcataatttttcgttcaactccccgcaaggtgcttgtccgcgt
tgtaaaggattgggagtagttagccagattgatgtggataaagtgattcccaataaagag
atgtcgatctatgaaggggcaatagctcctttgggtaaatataagaatgcgatgattttc
tggcagatcggtgctctgctggagaagtacgatgcgtcactgaagactccggtaaaagac
ctgcccaatgatgctattgatgaaattctgtatggttcggatgaacgtatcaaaataaaa
agctcattgataggtacttcttccgactattttgtaacgtatgaaggagttgtgaagtat
atccagatgttgcaagagaaagacgcttcggccactgctcagaaatgggcggaacagttc
gctaaaactacggtttgtcctgaatgtaagggggcgaagttgaataaggaggcgcttcat
ttccgtatccatgacaaaaacatcaatgaactctctaatatggacatcaacgagctgtat
gactggttgatgaaagtagataagttcctgacagataaacagaaaacgattgccgccgag
attctgaaggagatacgtacccgcttgaaattcctgttggatgtggggttggattatctt
tcgttaaatcgcagctcggtcagtctgtccggaggagaaagtcagcgtatccgtctggcc
acacaaattgggtctcagttggtcaatgtgctttatattcttgacgagccgagtatcgga
ttgcatcaacgtgataacttgcggctgattaattctctgaaagaactgcgtgatatgggt
aactccgtgatcgtggtagagcatgacaaagacatgatgcttgctgccgactacgtgatc
gatatgggacctaaggccggacgattgggaggagaagtcgtttttgccggtactcctgaa
gagatgttgaagaccagtacactgacttcgcagtaccttaacggacaaacggctatcgaa
gtaccttctaagagacgtcccggaaacggcaagtctttatggttacggggcgcgaaaggg
aataacctgaaaaatgtggatgtggaatttccgttgggtaaattaatttgtgtaaccgga
gtttccggtagtggcaaatcgactctgattaatgaaactttgcaaccgatactttcgcaa
aaattctatcgttctttgcaggatcctttggaatatgattcgatcgaaggacttgagaat
atagataaggtggttaatgtggaccagtcccctttggggcgtaccccacgttccaatccg
gctacttatactggggtcttttctgatatccggagtctgtttgtcggactgccggaagct
aagatccgcggttataagcccggccggttctctttcaatgtgtccggtggccgctgcgag
gcatgttccggtaacggctacaaaacgattgaaatgaatttcttacccgatgtatacgtt
ccgtgcgaagtctgtcatggtaaacgctataaccgtgaaacgctggaagtacgttttaag
ggaaaatctattgctgatgtgctggatatgactattaatcgtgcagtagagttctttgag
aatgttcctcagatcctgaataagatcaagactatccaagatgtaggattggggtatatc
aaactgggacaatcgtcaacaactctttcgggaggtgagagccagcgtgtgaaattggct
actgaactttcaaaacgagataccggaaagactttgtatattcttgatgaaccgactacc
ggcctgcattttgaagacatacgtgtgttgatgggagtcctgaataaattggtagataaa
ggcaataccgtgatcgttattgaacacaacctggatgtgattaagatggcggattacata
atagatatggggcctgaaggtggtaagggaggaggagaacttctcagtttcggaacaccg
gaagaagttgcgaagagcaacaaaggatatactccgaagtttcttcgcgaggaattgaaa
atcaattaa
DBGET
integrated database retrieval system
