Bacteroides fragilis NCTC 9343: BF9343_2798
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Entry
BF9343_2798 CDS
T00239
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs00300
Lysine biosynthesis
bfs00470
D-Amino acid metabolism
bfs01100
Metabolic pathways
bfs01110
Biosynthesis of secondary metabolites
bfs01120
Microbial metabolism in diverse environments
bfs01230
Biosynthesis of amino acids
Module
bfs_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
bfs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BF9343_2798
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BF9343_2798
Enzymes [BR:
bfs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BF9343_2798
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAH08579
UniProt:
Q5LBE1
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All DBs
Position
complement(3348138..3349301)
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AA seq
387 aa
AA seq
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MKTVFPIHKFRELPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTII
RESGLGADCVSGGEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELE
VINELAAAKGKVANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHV
KFIGLHFHIGSQILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQP
IPDFADYFRTYDEHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGM
TDLIRPALYQAHHKMENLTSQDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRS
AGAYGEIMASGYNCRELPKGYISEELV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtattccccattcataaatttcgcgagttgccgactcctttctattattat
gatacgaaagtgcttcgcgacacgctggcgtgcgtcaaccgtgaggtggcacgttacgac
aatttcagtgtacactatgccgtcaaggccaatgccaatcctaaggtactgaccatcatc
cgcgaaagtggactgggtgccgattgtgtcagcggaggcgaaatccgcgctgccatcaag
gccggtttccctgccgggaagatcgtttttgccggagtcggtaaggctgattgggaaatc
gacctgggactcgattacgatattttctgtttcaatgtcgagtcggtgcctgagttggaa
gtcatcaacgagctggctgccgccaaaggtaaagttgccaatgtagctttccgcatcaat
cccaatgtaggtgcgcatacccatgccaatatcactaccggattggccgaaaacaaattc
ggtatcagcatgcacgatatggataaggtgatcgacgtggctttggagctgaagcatgtg
aagttcatcggtcttcatttccacatcggttctcagattctcgatatgggcgatttcata
gcgctatgcaaccgtgtcaacgaattgcaggataagctcgaagcccgtcacatccttgtg
gagcatatcaacgtaggcggtgggctgggcatcgattatgatcaccccaaccgtcagcct
attccggattttgccgactatttccgtacatacgacgagcacctgaagcttcgtccgcat
cagactttgcattttgagctgggacgtgccatcacgggacaatgcggttcgctgatttca
aaagtactttatgtcaagcaaggtaccaacaagcaatttgccatcctcgatgcgggcatg
accgatttgattcgtcccgccctctatcaggcacatcacaagatggagaaccttacttcc
caagatcctgtggtcgaaacttatgacgtggtgggccccatctgtgagtcgtccgatgta
ttcggcaaggctgtcgatctgaataaggtgaagcgtggcgatctgatagcccttcgttct
gccggtgcttatggcgagattatggcttcaggttataactgccgtgaactgccgaaaggg
tacatctcagaggagttggtgtaa
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