Bacteroides fragilis NCTC 9343: BF9343_2895
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Entry
BF9343_2895 CDS
T00239
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_2895
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF9343_2895
Archaeal homologous recombinant proteins
BF9343_2895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_tran
AAA_22
Adeno_E3_15_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAH08676
UniProt:
Q5LB46
LinkDB
All DBs
Position
complement(3463154..3466117)
Genome browser
AA seq
987 aa
AA seq
DB search
MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR
FSASVESLYMSDIGESRVNQADVKNILRRGTGEGFAEVDFLGASGHCYRSRWSVRRTGSR
ANGALRSQTIQVTDLTANQELQGTRKELLAQLVTLVGLTYEQFTRTVLLAQNDFATFLKS
RESAKAELLEKLTGTEIYSRISSEIYLRSKTADAELNQLKSNATLIELLSEEEITLLRIE
KESLTNLREQGSKALIDLNAQLSVLHTLKLQQEQRDKKVQDMRLDEEKSKKLREEYTRQS
DSLIRFRGQCEAVQPDLSRARELDVQIQSLVSQSKQVEEILQGTEKAANAQANKLQSVQG
ALHTSCLSLKNLTGEIELPVTEETGLFLESIRNRLKEQEDQLAILQEKNEARVNRLNAFG
IEAVTDEQARWMQEQTRLQNARQQMLEWRKAGTEAERLKAQQEEMGHKQEQMRKEMTLLT
TRLSEKEAELKVLQRLFENVRIAMGKDVRTLRLNLRENEPCPVCGGTDHPYRNEEQVVHS
LYQNIEQEYQTASAEYQQLNNRNIALKQDLLHLSELSGEITVQLQAFLQEAEQKRPSSEE
EQNPDYFEKQLHTVQGKLNLLAEKMHQYHQLYKEWQQHEGQIRTVRSACEALREGVARCH
LLIQQVLAAKEQFELLKTAETTAREQFRVVSEQLITLRQERAPLLKGKSVEDAEAAIRKK
EKQLNDSVEQVRKEGEEVQSRISGMQGEIRQLNSSIDELMLRKEQIADPEHLPETIARQQ
ATNQETERRLSTVEARLLQQEQNRKKLKQLEQELTEKQETANRWGKLNKLIGSADGTKFK
VIAQSYTLNLLLMHANKHLSYLSKRYRLQQVPGTLALQVIDCDMCDEVRTVYSLSGGESF
LISLALALGLSSLSSNNLKVESLFIDEGFGSLDADSLRTVMEALEQLQMQGRKIGVISHV
QEMSERIAVQVQLHRAANGKSAITLTS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactaaccatacgattaaaaaatctggcttccattgaaggaacttttgaaatt
gatttccaagccgagcctttacgctctgccgggatttttgcaatatccggacctacagga
gccggaaaatctacgatactggatgcgctctgtctggcgctgtatgataagacaccccgc
ttctccgcttcggttgagagtctttatatgtcagatatcggtgagagtcgggtgaatcag
gccgatgtgaagaatatccttcgcagagggacgggagagggatttgccgaagttgatttt
ttaggagcgtccggacactgttatcgttctcgttggtcggtacgccggacaggaagccgg
gctaacggtgctttgcggtcgcagacgatacaagtgaccgatctgactgccaatcaggaa
ctacagggaacgaggaaagagttgttggcacaattggtgactttggtcggtttgacttac
gaacagtttacccgtacggtgctgcttgcccagaatgacttcgctactttcttgaaatcc
cgtgagtctgccaaagccgagttgctcgagaagctgaccggaacggagatatactcccgt
atttccagtgaaatctatctgcgtagcaaaacagccgatgcagaactgaatcagctgaag
agcaatgccactctgatcgaactgctttccgaagaggaaatcactcttctacggatcgaa
aaagagagtctgaccaaccttcgtgaacagggaagcaaagcattgatagacctgaatgca
cagctatcggtgctgcatactttgaaattgcagcaggagcagcgtgataagaaagtgcag
gatatgcggctggatgaagaaaaaagtaagaagctccgggaagaatatacacgccagtcc
gactctctcattcgcttcaggggacagtgtgaagctgtgcaacccgatcttagccgggca
cgtgaactggatgttcagattcaatcactggtcagccaatctaagcaggtagaggagata
ctgcaaggtactgaaaaggcagcgaatgcacaagccaataaattgcaatctgtgcaggga
gccctgcatacttcctgcctttcgttgaagaatctgacgggagagatcgagctaccggtt
acggaagagaccgggctatttcttgaatctatccggaacaggctgaaagagcaggaagac
caacttgccattcttcaggaaaagaacgaagcgcgtgtgaaccgtctgaatgcttttggg
attgaagcggtgactgacgagcaagcccgatggatgcaggaacaaacccgtttgcagaat
gcccgccagcagatgttggaatggagaaaagcggggacagaggccgaacgtctgaaagca
caacaggaagagatggggcacaaacaagaacagatgcggaaagagatgacccttctgacc
acccggttgtcagagaaggaggctgaactgaaagtgctgcaacgcctttttgagaatgtc
cgtatcgcgatggggaaagacgttcggaccttgcggctgaatttgcgtgagaatgaaccg
tgtccggtatgtgggggcactgaccatccttataggaatgaggaacaggtagtccatagt
ctgtatcagaacatcgaacaggaatatcaaaccgcatctgctgagtatcagcaactaaat
aaccggaatattgccttgaaacaggatttgcttcatctgtcggaattgtccggagagata
accgtacagttgcaggcgttcctccaagaggctgagcagaaacgtccttcgtctgaggag
gagcaaaatccggactattttgagaaacaattgcataccgtgcaagggaagctaaatctg
ctcgcggagaaaatgcaccaataccatcagctctacaaggaatggcaacagcatgagggg
cagatcaggacggttcgctcggcttgtgaggctttgcgcgaaggggtggcccgttgccat
ctgttgatacagcaagttctggctgctaaagagcaatttgaactactgaaaacggcggaa
acgactgctcgggagcagttccgagtggtcagtgaacagttgataactctccgtcaggaa
cgggctcctttgttgaaaggcaaatctgtcgaggatgcggaagccgctattcggaaaaaa
gaaaaacaattaaacgattccgtggaacaggtgcgcaaggagggagaagaagtccagtcg
cgtatttccggtatgcagggagagatcagacaactgaacagctccatcgacgaattgatg
ctccggaaagaacagatagccgatccggaacatttgccggagacgatcgcccgccagcaa
gccaccaatcaggagaccgaacggcgtctgtcgaccgtcgaagcacgtcttttgcaacag
gagcaaaaccggaagaagctgaagcaactggagcaggaactgaccgaaaaacaggagaca
gccaaccgatggggaaaactcaataaactgattggcagtgcggacgggacaaagttcaag
gtgattgcccaaagctatacgttgaatctgttgctgatgcatgccaacaagcacctgtct
tatctatcgaaacgttaccggttgcagcaggtgccgggaacgctcgccctgcaagtgatc
gactgcgatatgtgtgacgaggtgcgtaccgtttattctctttccggcggagaatctttt
ctgatttccctggcgttggctctcggcttgtcgtctctttcgagcaataacctgaaagtg
gagtcacttttcatcgacgaaggtttcggttcgctcgatgccgacagtttgcgcacggtg
atggaagctctcgagcaattgcagatgcagggacggaagatcggagtcatttcccatgta
caggagatgagtgagcgcatcgccgtgcaagtgcaactccatcgcgcggcgaatgggaag
agtgctatcactttgacaagttga
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