Bacteroides fragilis NCTC 9343: BF9343_2896
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Entry
BF9343_2896 CDS
T00239
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_2896
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF9343_2896
Archaeal homologous recombinant proteins
BF9343_2896
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Surfac_D-trimer
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
CAH08677
UniProt:
Q5LB45
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Position
complement(3466286..3467518)
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AA seq
410 aa
AA seq
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MIRILHTADWHLGQTFFGYDRTQEHEHFLDWLAGVLTKNKIDVLIVAGDVFDVSNPSAAS
QRMFYRFIHRVTTENPRLQLVVVAGNHDSAARLESPLPLLQEMRTEIKGIVHKQNGKIDY
EHLLVELKNAAGEVEALCLAVPFLRQGDYPVVETEGNPYAEGVKELYARLLKYALKKRTD
GQALVAVGHLLATGSEIAEKDHSERIIIGGLESVSPESFPEQIVYTALGHIHKAQRVSGR
ENIRYAGSPLPMSFAEKHYHHGVVKVTLDEGWAVEIEKLEYTPLVRLLSIPATEAAAPDE
VLDELRGLELPEDEPMPYLEVKVKLSEPEPMLRQQVEEILEGKPVRLARIVSFYRQAAEG
SVEEETLTAGLQEMNPLQIVKATFENSYQAEMPEELVNLFQEACRTINLE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtatactacatacagccgattggcatttgggacaaacctttttcgggtatgac
cgcacacaggaacacgaacattttctggactggttggccggtgtcctcactaagaacaag
attgatgtactgattgttgccggagatgtctttgatgtttccaatccgtctgctgcttcc
cagcggatgttctatcgtttcattcacagggtgacgactgagaatccgcgattgcagttg
gttgttgtggccggcaatcacgattcggctgcccggctggaatctcctctgcctttgttg
caggagatgcgtacggagattaaaggaattgtccataaacagaatggcaaaatagattat
gagcatttactggtagaattgaagaatgcggcgggggaggtagaagccctatgcctggcg
gtacctttcttgcgacagggagactatccggtggtagagactgaaggcaatccgtatgcg
gaaggggtgaaggaactgtatgcccgtttgttgaaatatgcgttgaagaagcggactgac
ggacaggcattggtggctgtcggacacctgctggcaaccggttcggagattgccgagaaa
gatcatagtgagcgcatcatcatcggtggtctggagagtgtatcgcccgagtcttttccc
gaacagattgtttatacggctttagggcatatccacaaggctcagcgcgtatcgggcagg
gagaatatccgttatgccggcagtcccttacctatgtcgtttgccgagaagcattatcac
cacggagtggtaaaagtgaccctggatgaaggttgggcggttgagatagagaaacttgaa
tatactccgttggtgcgtttgctaagtatccctgccacagaagctgcggctccggacgag
gtgctggatgaattgcgcgggctggaactaccggaagatgaaccgatgccctatctggaa
gtcaaggtgaaactaagcgaaccggagccgatgttgcggcagcaagtggaagaaatactg
gaaggcaagccggtccggctggcccgtatcgtttctttctatcggcaggcggcagagggg
agcgtggaagaagaaaccctgaccgccggattgcaggagatgaatcccttacagattgtg
aaagcaacctttgagaatagttaccaggcggagatgccggaagaactggtaaatttgttc
caggaggcttgccggaccatcaatttagaatga
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