Bacteroides fragilis NCTC 9343: BF9343_2970
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Entry
BF9343_2970 CDS
T00239
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs02024
Quorum sensing
bfs03060
Protein export
bfs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BF9343_2970 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BF9343_2970 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BF9343_2970 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bfs02044
]
BF9343_2970 (ffh)
Enzymes [BR:
bfs01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BF9343_2970 (ffh)
Secretion system [BR:
bfs02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BF9343_2970 (ffh)
Eukaryotic Sec-SRP protein
BF9343_2970 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
AAA_33
SRPRB
cobW
AAA_17
APS_kinase
AAA_31
AAA_24
AAA_18
nSTAND3
AAA_16
6PF2K
MMR_HSR1
NACHT
DO-GTPase1
TsaE
KTI12
Fe-ADH
AAA_30
ATPase
AAA_14
KAP_NTPase
AAA_19
NPHP3_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAH08751
UniProt:
Q5LAX2
LinkDB
All DBs
Position
3556110..3557429
Genome browser
AA seq
439 aa
AA seq
DB search
MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL
GQNVLTAVKPSQLMVKIVHDELTQLMGGETVEIDTKGQPAVILMSGLQGSGKTTFSGKLA
RMLKTKKNKRPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEIDSKDPVSIAQNAIKEARA
KGYDLVIVDTAGRLAVDEQMMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERLD
FDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIV
SLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQISQIKKMGNLKELASMIPGVGKAIK
DIDIDDNAFKSIEAIIYSMTPEERSNPGILNGSRRTRIAKGSGTTIQEVNRLLKQFDQTR
KMMKMVTSSKMGKMMPKMK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaatttaagcgaaagactcgaaaggtcgtttaagattctgaaaggtgaaggc
aaaatcaccgagatcaacgtagcagaaaccctgaaagacgtgcgcaaggcactgctcgat
gccgacgttaactataaagtagccaaaggattcactgatacggtgaaggaaaaggcactg
ggacagaacgtgctcacagccgtaaaaccgagccagttgatggtgaagattgttcatgac
gaactgacccagctgatgggtggagaaactgtcgaaatcgacaccaaaggtcagccggca
gtcatcctgatgtccggtttgcaaggttcgggtaagaccactttctcgggtaagctggcc
cgcatgctgaaaaccaagaagaacaaacgcccgttgctcgttgcatgtgacgtttaccgt
ccggcagctatcgagcagcttcgcgtattggccgaacagattgacgtaccgatgtactcg
gagatcgacagcaaagatccggtttccatcgcccagaatgccatcaaagaagcacgtgcc
aagggatacgatctggtaattgtcgatacggccggacgtctggcagtcgacgaacagatg
atgaatgagatcgctgccatcaaagaagccatccagcccaacgaaattttgttcgtggta
gactctatgaccggacaagatgcggtcaacacagccaaagagttcaacgaacgcctcgac
tttgacggcgtggtgctgaccaagctcgacggtgatacccgcggtggtgcggccctctct
atccgttcggtagtgaacaaacctatcaagtttgtaggtacgggcgagaaactcgatgcc
atcgaccagttccaccctgcccgtatggccgaccgtatcctgggtatgggtgacatcgtt
tcgttggtggaacgcgcacaggaacaatatgacgaagaagaagctaaacgccttcaaaag
aagattgccaagaaccaattcgacttcaacgacttcctcagccagatctcccagattaag
aaaatgggtaatctgaaagagctcgcttcaatgattccgggtgtgggcaaggccatcaaa
gatatcgatatcgacgacaatgctttcaaaagcatcgaagccatcatctactccatgact
ccggaggaacgcagcaatccgggcatcctgaacggttcgcgccgtacacgtatcgccaaa
ggtagcggtacgactatccaggaggtgaaccgtctgctgaaacagtttgaccagactcgc
aaaatgatgaagatggtgaccagcagcaagatgggcaagatgatgccgaagatgaaataa
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