Bacteroides fragilis NCTC 9343: BF9343_2985
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Entry
BF9343_2985 CDS
T00239
Name
(GenBank) putative DNA polymerase III
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03030
DNA replication
bfs03430
Mismatch repair
bfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BF9343_2985
03430 Mismatch repair
BF9343_2985
03440 Homologous recombination
BF9343_2985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfs03032
]
BF9343_2985
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_2985
Enzymes [BR:
bfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BF9343_2985
DNA replication proteins [BR:
bfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BF9343_2985
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BF9343_2985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_14
DNA_pol3_delta_C
AAA_5
RCF1-5-like_lid
AAA_30
AAA_19
AAA_24
Rad17
NTPase_1
AAA_18
ResIII
Mg_chelatase
AAA_2
AAA_16
RNA_helicase
AAA_7
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAH08766
UniProt:
Q5LAV7
LinkDB
All DBs
Position
complement(3573852..3575696)
Genome browser
AA seq
614 aa
AA seq
DB search
MENYIVSARKYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFA
KTINCMNLTADGEACNECESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIG
KYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRI
SVDDTVNHLTYVASKEGITAEPEALNVIALKADGGMRDALSIFDQVVSFTGGNITYKSVI
ENLNVLDYEYYFRLTDCFLENKVSDALLLFNDVLNKGFDGSHFITGLSSHFRDLLVSKDA
ATLQLLEVGAGIRQRYQEQAQKCALPFLYRAMKLCNDCDMNYRASKNKRLLVELTLIQVA
QLTVEGDDGSGGRGPKQAIKPIFTQPAAAQQPQVAPIASPSQSMNAATPVAPQAVSQQAG
SSPAVNVRPGGAVSPSGAMPDAVRMAQFKEEKKIPVMKKSSLGLSIKHPQKEEEQRGAGV
VHTAHMSTQQIEEDFIFNERDLNYYWQEYAGRMPIEQKAIAMRMQNMRLSLLNDTTFEVV
VDNEIIAKDFTALIPGIQAYLRGSLKNRKVTMTVRVSEATENVRAVSRVEKFQMMAQKNN
ALLQLKEEFGLELY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactatatcgtatccgcccgtaaataccgcccttccacttttgagtcggttgtg
ggacaacgggcactgaccactacactgaaaaatgctatcgccactcagaaactggcgcat
gcttacctgttctgcggaccgcgcggagtgggtaaaacgacttgtgcacgtatctttgcc
aagaccattaactgtatgaaccttacggcagatggcgaagcctgtaatgaatgtgagtcg
tgtgtcgccttcaacgagcaacggtcgtacaatattcacgagctggatgcggcgtccaat
aactcggtagacgatatccgtcagttggtggagcaagtacgcattccgccccagattggc
aaatataaagtatatatcattgacgaggtacacatgttgtcagcttcggcattcaatgct
tttctgaaaacacttgaagagcctccccgccacgccatatttattcttgcaacaacggag
aaacataagattcttcctaccatcttgtcgcgttgtcagatttacgactttaaccgtatc
agcgtagatgatactgtgaaccatttgacttacgtagcgtctaaagaaggaatcacggcg
gagcctgaagccttgaacgtgattgcgctcaaagcggatgggggtatgcgtgacgctctc
tctatctttgatcaggtggttagtttcaccggaggaaatatcacctacaagagtgtgatt
gagaatctcaatgtattggattacgagtattacttccgtttgacagactgttttcttgag
aataaagtgagcgatgccttgttgcttttcaacgatgtgctcaacaagggattcgacgga
agtcactttattaccggactttcatctcatttccgcgacttgctggttagtaaagatgcc
gccacgcttcagttgcttgaggtaggtgccggtattcgtcaacgctatcaggaacaagcg
cagaagtgtgcgttacctttcttgtaccgggccatgaagctttgcaatgattgtgacatg
aattatcgtgctagcaaaaacaagcgtttgctggtggaactgactttgatacaagttgcg
cagcttaccgtcgagggggatgatggtagtggtgggcgtggccctaaacaagctataaaa
cccattttcacgcaacccgccgctgctcagcagcctcaggtagcacctattgcttcacca
tctcagagtatgaatgctgctacacctgttgctccgcaggctgtgtctcaacaggctggc
agttccccagctgtcaatgtacgtccgggtggagcagtttctccatcgggtgctatgccc
gatgcggtacggatggctcaatttaaagaggaaaagaagattcctgtcatgaaaaagtcc
agtcttggactttccatcaagcatccgcaaaaggaggaagaacagcggggagcgggtgtt
gtccatactgctcatatgtcgacgcagcagatcgaagaagattttatttttaacgaacgg
gatctgaattattattggcaggagtatgccggacgtatgccgatcgaacaaaaggcgata
gccatgcgtatgcagaatatgcgtttgtcattgctcaacgacacgacttttgaggtggtg
gtagataatgaaatcattgcgaaagatttcacggctctgattcccggtatacaagcttac
ttgcgtggttcgctgaagaatcgtaaggtgacaatgactgtccgcgtcagtgaagcaacc
gaaaatgtacgtgctgtcagtcgtgtggaaaagtttcagatgatggctcaaaagaataat
gcattgttacagttgaaggaagaatttgggttggaactctactaa
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