Bacteroides fragilis NCTC 9343: BF9343_3061
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Entry
BF9343_3061 CDS
T00239
Name
(GenBank) putative LacI-family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfs03000
]
BF9343_3061
Transcription factors [BR:
bfs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BF9343_3061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_24
HTH_23
HTH_38
HTH_11
MarR_2
MarR
HTH_Tnp_ISL3
HTH_7
HTH_28
HTH_3
HTH_5
Sigma70_r4_2
HTH_AraC
HTH_10
HTH_Crp_2
HTH_IclR
HTH_AsnC-type
Fe_dep_repress
HTH_29
AbiEi_4
HTH_Tnp_1
HTH_36
TnsD
HTH_Tnp_Tc3_2
HTH_26
HTH_17
HTH_8
Phage_terminase
Sigma70_r4
MerR
CENP-B_N
Sigma54_DBD
Cro
HTH_31
HTH_1
TetR_N
HTH_20
IF2_N
Xre-like-HTH
GerE
Motif
Other DBs
NCBI-ProteinID:
CAH08842
UniProt:
Q5LAN1
LinkDB
All DBs
Position
3674105..3675115
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AA seq
336 aa
AA seq
DB search
MSKPQITIKDIARELGVSPSTVSRALKDNPDISQETRDAIHKYAREHNYKPNVLALNLRT
SRSNTIGVIIPQLVHHFFSCVLSGIERTAAEAGYNILVAQSNEEYEREVKIVHSFLAARV
CGVITSLAKDTSRYDHYQELLDNNIPIVFYDRICTGINTERVVVDDYAGSFAAVEYMIQT
GCKRIFFYSAAPHLEISKNRRNGYMDAMKKYRIPVDQSMIKLCDSREKAIAITPALLERP
DHPDGFFAINDETASGILYSCKLTGRKVPDEVSICGFTDGAIAQSTDPKLTTVEQHGEEV
GKSTIRLLIDKLEGNDEGKSGNKIVRTNLVVRGTTK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgcaaatcaccatcaaagacattgcccgcgaactgggggtatcgccctcc
accgtatcgagagcactgaaggacaatccggacatcagccaggagacgagggatgctata
cataagtacgcgcgcgaacataattataagcccaacgtactggcactgaacctgcgcacc
agccgttcgaacaccatcggggtcatcatcccccagttagttcaccacttcttttcgtgt
gtgctgagcggcattgagagaacggcggccgaagcgggctacaacatcctggtggcgcaa
agcaacgaggagtacgagcgggaggtaaaaatcgttcactccttcctcgccgcacgggtt
tgcggagtcatcacttcgctcgccaaagacacatcccgatatgaccattaccaggaattg
ctggacaacaatattcctatcgttttctacgatcgcatctgtaccggtatcaacaccgaa
cgggtggtggtagacgattacgccggttcgtttgccgccgtggagtatatgatacagacg
ggctgcaagcgcatcttcttttatagcgccgctccccacctcgaaatatcgaaaaaccgg
cggaacggttatatggacgcgatgaaaaagtatcggattccggtggaccaaagcatgata
aagttatgtgacagccgcgaaaaagcgatcgccatcacacccgctctgctcgaaaggccg
gatcatccggacggcttcttcgccatcaatgacgaaacagcttcgggcatcctctactcg
tgcaaactgaccggacggaaagtgcccgacgaagtgtccatctgcggattcaccgacggc
gccatcgcccaaagcacagatccgaagctgaccacagtggagcaacatggcgaagaggtg
ggcaaaagcaccatcaggctgctgatagacaaactggaagggaacgatgaaggaaaaagc
ggtaataaaatcgtgcgtaccaacttagtggtacggggaacgacgaaataa
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