Bacteroides fragilis NCTC 9343: BF9343_3362
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Entry
BF9343_3362 CDS
T00239
Symbol
rfbC1
Name
(GenBank) putative LPS biosynthesis related dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs00521
Streptomycin biosynthesis
bfs00523
Polyketide sugar unit biosynthesis
bfs00541
Biosynthesis of various nucleotide sugars
bfs01100
Metabolic pathways
bfs01110
Biosynthesis of secondary metabolites
bfs01250
Biosynthesis of nucleotide sugars
Module
bfs_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BF9343_3362 (rfbC1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BF9343_3362 (rfbC1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BF9343_3362 (rfbC1)
Enzymes [BR:
bfs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BF9343_3362 (rfbC1)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAH09143
UniProt:
Q5L9T4
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Position
complement(4077506..4078048)
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AA seq
180 aa
AA seq
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MNVIKTAIDGVVILEPRIFKDDRGYFFESFNQREFEEKVCKTTFVQDNESKSSYGVLRGL
HFQQAPFAQSKLVRVVKGAVLDVAVDIRKGSPTFGQHVAVELTEDNHRQFFIPRGLAHGF
SVLSEEVVFQYKCDNFYAPHSEGAITWDDPDLGIDWRIPADRVILSEKDSRHPRLKDLNL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaataaagactgctatcgatggggttgttatcctcgaaccccgtatttttaaa
gatgaccggggatatttctttgaatcttttaatcagagggagtttgaggaaaaagtatgc
aagactacatttgtccaagataatgaaagtaaatcgagttatggtgtacttcgtggttta
cattttcaacaggccccttttgctcagagtaaattggtgcgtgtagtgaaaggagcggta
ttggatgtagctgttgatatccgtaaaggatctcctacatttggacaacatgtggcagta
gagttgacggaggataatcatcgtcaatttttcattccccgtgggttggcacatggattc
agtgtattgagcgaggaagtcgtttttcagtataagtgtgataatttttatgctccgcat
agtgagggtgccattacctgggatgatccggatttgggtattgactggcgtattccggca
gatcgtgtgattctctcggagaaggacagcaggcatccccggttgaaagatttaaattta
tga
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