Bacteroides fragilis NCTC 9343: BF9343_3478
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Entry
BF9343_3478 CDS
T00239
Name
(GenBank) putative RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF9343_3478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfs03021
]
BF9343_3478
Transcription machinery [BR:
bfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF9343_3478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
GerE
Sigma70_r4
SopA
HTH_40
Phage_Repressor_c
Mycobacteriophage_Gp53
PhyR_sigma2
DUF3741
FAM237_M
TnsD
HTH_24
HTH_10
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CAH09259
UniProt:
Q5L9G8
LinkDB
All DBs
Position
complement(4211617..4212189)
Genome browser
AA seq
190 aa
AA seq
DB search
MKENTMYSNLESVEQLFRQYYKVLRVYAFRFVNDWDIAEDVVQDVFVALWNKRTDIEFDG
AVKAYLFKAVYNKSLNILSSKKYTEEESVEQFSDQIEALQILENNQENSLFMKELQGEIE
TFIETLPTQVKKVFILSRSYGLKIKEISVQLDLSPKTVEKYLTRALLELRTHLKNKDLMS
LLFLLYLCSK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaatacaatgtattcgaatcttgaatcggtagaacaattatttcggcaatat
tataaggtgttgcgggtatatgcgttccgttttgtgaatgattgggatattgcagaagac
gtagtgcaggatgtttttgttgctttatggaataaacgtacagatattgaatttgatggc
gcggtaaaagcctatctttttaaggctgtctataataaatcgcttaatatcctttccagt
aagaaatataccgaagaagaatccgtagaacaattttccgatcaaatcgaagcactgcaa
attctggagaataatcaggaaaactcgttgttcatgaaagaactccagggtgaaattgaa
acttttatcgaaacacttcctacgcaagtaaaaaaggtatttatattaagtagaagctat
ggtctgaaaataaaggaaatctccgttcagctcgatctttctccaaaaaccgtagaaaag
tatttgacccgtgctttgttggaactacgtactcatcttaaaaacaaggatttaatgagt
cttttattcttgctttatctctgctctaaataa
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